RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 ZNF18P17022 549 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 PSMA2P25787 234 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 ANKRD40Q6AI12 368 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 B4GALNT4Q76KP1 1039 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 KCTD17Q8N5Z5 321 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 CDKL2Q92772 493 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 GCNAQ96QF7 691 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 REEP2Q9BRK0 252 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 KCNH7Q9NS40 1196 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 IPO11Q9UI26 975 aaKnown RBP21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 TMX2Q9Y320 296 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 ENOSF1Q7L5Y1 443 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 TMEM143Q96AN5 459 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 TAAR1Q96RJ0 339 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 SH2D3AQ9BRG2 576 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 CNOT8Q9UFF9 292 aaKnown RBP21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 CIITAP33076 1130 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 RPUSD2Q8IZ73 545 aaKnown RBP21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 GIMAP7Q8NHV1 300 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 NUDT12Q9BQG2 462 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 TMEM60Q9H2L4 133 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 SPDYE16A6NNV3 312 aaPredicted RBP21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 SH3BP5O60239 455 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 TRIM49P0CI25 452 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 TRIM49CP0CI26 452 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 FXR2P51116 673 aaKnown RBP eCLIP21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 LLGL1Q15334 1064 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 SPDYE2Q495Y8 402 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 ZNF710Q8N1W2 664 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 GMCL1Q96IK5 515 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 NCAPGQ9BPX3 1015 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 MYO5BQ9ULV0 1848 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 YWHAGP61981 247 aaKnown RBP eCLIP21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 CCDC68Q9H2F9 335 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 NGRNQ9NPE2 291 aaKnown RBP21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 EMSYQ7Z589 1322 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 CCDC13Q8IYE1 715 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 GMCL1P1Q8NEA9 526 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 FBXL13Q8NEE6 735 aa21.04■□□□□ 0.96
SEMA6C-201ENST00000341697 RPA1P27694 616 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 RFC5P40937 340 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 RWDD2BP57060 319 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 DPYDQ12882 1025 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 DRAP1Q14919 205 aaPredicted RBP21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 DARS2Q6PI48 645 aaKnown RBP21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 GPRASP2Q96D09 838 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 CAMTA1Q9Y6Y1 1673 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 CALB1P05937 261 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 PLS3P13797 630 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 STX2P32856 288 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 PRKCEQ02156 737 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 NBPF12Q5TAG4 269 aaPredicted RBP21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 ANKRD42Q8N9B4 389 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 STRIP2Q9ULQ0 834 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 OAS2P29728 719 aaKnown RBP21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 DHX40Q8IX18 779 aaKnown RBP21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 KIF12Q96FN5 646 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 RHOBTB3O94955 611 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 HEXIM1O94992 359 aaKnown RBP21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 ACAP3Q96P50 834 aa21.03■□□□□ 0.96
SEMA6C-201ENST00000341697 GPC5P78333 572 aa21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 CDO1Q16878 200 aa21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 HINFPQ9BQA5 517 aa21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 FAM217BQ9NTX9 383 aaPredicted RBP21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 SLC16A3O15427 465 aaKnown RBP21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 ACTN1P12814 892 aa21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 EMC2Q15006 297 aa21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 UHMK1Q8TAS1 419 aaKnown RBP21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 MAP3K20Q9NYL2 800 aaKnown RBP21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 GMNNO75496 209 aa21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 PPARDQ03181 441 aa21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 CCHCR1Q8TD31 782 aa21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 ANAPC7Q9UJX3 599 aa21.02■□□□□ 0.96
SEMA6C-201ENST00000341697 A0A1W2PQC6 194 aa21.02■□□□□ 0.95
SEMA6C-201ENST00000341697 MYMKA6NI61 221 aa21.02■□□□□ 0.95
SEMA6C-201ENST00000341697 SEC23AQ15436 765 aa21.02■□□□□ 0.95
SEMA6C-201ENST00000341697 TOGARAM2Q6ZUX3 1019 aa21.02■□□□□ 0.95
SEMA6C-201ENST00000341697 HPS3Q969F9 1004 aa21.02■□□□□ 0.95
SEMA6C-201ENST00000341697 LCMT1Q9UIC8 334 aa21.02■□□□□ 0.95
SEMA6C-201ENST00000341697 PIN4Q9Y237 131 aaKnown RBP21.02■□□□□ 0.95
SEMA6C-201ENST00000341697 PASD1Q8IV76 773 aa21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 ADSSL1Q8N142 457 aa21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 RDM1Q8NG50 284 aa21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 UBE4BO95155 1302 aa21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 INPP5BP32019 993 aa21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 ARHGEF18Q6ZSZ5 1173 aa21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 ZNF560Q96MR9 790 aa21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 DDNO94850 711 aaPredicted RBP21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 XPAP23025 273 aaPredicted RBP21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 EPB41L5Q9HCM4 733 aa21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 ASAP2O43150 1006 aa21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 TEX33O43247 280 aa21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 MGARPQ8TDB4 240 aa21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 CALR3Q96L12 384 aaKnown RBP21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 HSPBP1Q9NZL4 362 aa21.01■□□□□ 0.95
SEMA6C-201ENST00000341697 FKBP1AP62942 108 aaKnown RBP21■□□□□ 0.95
SEMA6C-201ENST00000341697 ARID5BQ14865 1188 aa21■□□□□ 0.95
SEMA6C-201ENST00000341697 DACT2Q5SW24 774 aa21■□□□□ 0.95
SEMA6C-201ENST00000341697 USP49Q70CQ1 688 aa21■□□□□ 0.95
SEMA6C-201ENST00000341697 CEP57Q86XR8 500 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms