RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 TRIM49CP0CI26 452 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 RFX1P22670 979 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 GNGT1P63211 74 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 MAPK7Q13164 816 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 MYBPC2Q14324 1141 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 AP1M1Q9BXS5 423 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 INTS2Q9H0H0 1204 aaKnown RBP15.82■□□□□ 0.12
TDP2-201ENST00000341060 RASSF4Q9H2L5 321 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 KRIT1O00522 736 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 TRIM66O15016 1216 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 HIP1RO75146 1068 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 KCNA3P22001 575 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 SLC20A2Q08357 652 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 DNAJC21Q5F1R6 531 aaKnown RBP15.81■□□□□ 0.12
TDP2-201ENST00000341060 EMC10Q5UCC4 262 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 LDHDQ86WU2 507 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 C10orf67Q8IYJ2 551 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 DAW1Q8N136 415 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 BANK1Q8NDB2 785 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 SLC35G2Q8TBE7 412 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 ZFP91Q96JP5 570 aaPredicted RBP15.81■□□□□ 0.12
TDP2-201ENST00000341060 MXRA8Q9BRK3 442 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 DDX47Q9H0S4 455 aaKnown RBP15.81■□□□□ 0.12
TDP2-201ENST00000341060 SLITRK6Q9H5Y7 841 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 OSGEPQ9NPF4 335 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 ZNF70Q9UC06 446 aaPredicted RBP15.81■□□□□ 0.12
TDP2-201ENST00000341060 TTC7AQ9ULT0 858 aaPredicted RBP15.81■□□□□ 0.12
TDP2-201ENST00000341060 ZNFX1Q9P2E3 1918 aaKnown RBP15.81■□□□□ 0.12
TDP2-201ENST00000341060 FER1L6Q2WGJ9 1857 aa15.81■□□□□ 0.12
TDP2-201ENST00000341060 ARHGEF35A5YM69 484 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 BCRP11274 1271 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 HLTFQ14527 1009 aaKnown RBP eCLIP15.8■□□□□ 0.12
TDP2-201ENST00000341060 CTNNBL1Q8WYA6 563 aaPredicted RBP15.8■□□□□ 0.12
TDP2-201ENST00000341060 FEM1BQ9UK73 627 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 AMFRQ9UKV5 643 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 BUB1BO60566 1050 aaPredicted RBP15.8■□□□□ 0.12
TDP2-201ENST00000341060 EXOC3O60645 756 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 HSD17B4P51659 736 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 PPATQ06203 517 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 ZYXQ15942 572 aaKnown RBP15.8■□□□□ 0.12
TDP2-201ENST00000341060 KCTD16Q68DU8 428 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 RSBN1LQ6PCB5 846 aaPredicted RBP15.8■□□□□ 0.12
TDP2-201ENST00000341060 KDM7AQ6ZMT4 941 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 SYCP3Q8IZU3 236 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 SH2D3CQ8N5H7 860 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 TTLL6Q8N841 843 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 LMO3Q8TAP4 145 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 BCAS4Q8TDM0 211 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 TMEM174Q8WUU8 243 aa15.8■□□□□ 0.12
TDP2-201ENST00000341060 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.8■□□□□ 0.12
TDP2-201ENST00000341060 K7ENM7 598 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 TBC1D12O60347 775 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 ITGB5P18084 799 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 KIF22Q14807 665 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 DLGAP5Q15398 846 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 SPDYE2Q495Y8 402 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 PHLDB3Q6NSJ2 640 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 SEC14L1Q92503 715 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 FBXO28Q9NVF7 368 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 PLAAQ9Y263 795 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 IGSF9BQ9UPX0 1349 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 MAPTP10636 758 aaKnown RBP15.79■□□□□ 0.12
TDP2-201ENST00000341060 ITGA4P13612 1032 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 CORO7P57737 925 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 ALCAMQ13740 583 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 PADI6Q6TGC4 694 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 LRIG3Q6UXM1 1119 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 INTS8Q75QN2 995 aaKnown RBP15.79■□□□□ 0.12
TDP2-201ENST00000341060 MAATS1Q7Z4T9 603 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 LRRC45Q96CN5 670 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 HOOK2Q96ED9 719 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 ATP6V1G3Q96LB4 118 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 GMLQ99445 158 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 LARSQ9P2J5 1176 aaKnown RBP15.79■□□□□ 0.12
TDP2-201ENST00000341060 AMACRQ9UHK6 382 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 DIS3Q9Y2L1 958 aaKnown RBP15.79■□□□□ 0.12
TDP2-201ENST00000341060 RPTORQ8N122 1335 aa15.79■□□□□ 0.12
TDP2-201ENST00000341060 HMGB1P1B2RPK0 211 aaPredicted RBP15.78■□□□□ 0.12
TDP2-201ENST00000341060 ABCB4P21439 1286 aa15.78■□□□□ 0.12
TDP2-201ENST00000341060 CAP2P40123 477 aa15.78■□□□□ 0.12
TDP2-201ENST00000341060 MIER3Q7Z3K6 550 aa15.78■□□□□ 0.12
TDP2-201ENST00000341060 CCDC26Q8TAB7 109 aa15.78■□□□□ 0.12
TDP2-201ENST00000341060 TMEM206Q9H813 350 aa15.78■□□□□ 0.12
TDP2-201ENST00000341060 KCNH7Q9NS40 1196 aa15.78■□□□□ 0.12
TDP2-201ENST00000341060 PPP1R9AQ9ULJ8 1098 aa15.78■□□□□ 0.12
TDP2-201ENST00000341060 ANKRD62A6NC57 917 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 DDX3YO15523 660 aaKnown RBP15.77■□□□□ 0.12
TDP2-201ENST00000341060 ZEB2O60315 1214 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 ICAM1P05362 532 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 P4HBP07237 508 aaKnown RBP15.77■□□□□ 0.12
TDP2-201ENST00000341060 KRT13P13646 458 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 NR1D1P20393 614 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 TNFAIP3P21580 790 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 HSD17B3P37058 310 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 PTGER2P43116 358 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 CCT5P48643 541 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 PDCLQ13371 301 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 ARHGAP44Q17R89 818 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 DCAF12L1Q5VU92 463 aa15.77■□□□□ 0.12
TDP2-201ENST00000341060 FKBP1CQ5VVH2 108 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms