RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 MSH2P43246 934 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 CCT5P48643 541 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 YAF2Q8IY57 180 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 MCPH1Q8NEM0 835 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 CHST13Q8NET6 341 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 CCDC68Q9H2F9 335 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 RPF1Q9H9Y2 349 aaKnown RBP13.79□□□□□ -0.2
DNMT1-201ENST00000340748 RAG1P15918 1043 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 ARL4AP40617 200 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 DHX40Q8IX18 779 aaKnown RBP13.79□□□□□ -0.2
DNMT1-201ENST00000340748 ATP6V0A4Q9HBG4 840 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 SLC38A10Q9HBR0 1119 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 ATP8B3O60423 1300 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 MIF4GDA9UHW6 222 aaKnown RBP13.78□□□□□ -0.2
DNMT1-201ENST00000340748 K7ERI5 159 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 WNT10BO00744 389 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 CPP00450 1065 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 ATP2C1P98194 919 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-201ENST00000340748 MUM1Q2TAK8 710 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 NXNQ6DKJ4 435 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 MYPNQ86TC9 1320 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 BBS5Q8N3I7 341 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 KCTD6Q8NC69 237 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 DNAJC12Q9UKB3 198 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 NNTQ13423 1086 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 CASP8Q14790 479 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 PSMD6Q15008 389 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 SFR1Q86XK3 245 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 ATG4CQ96DT6 458 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 ADAMTS1Q9UHI8 967 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 CAP2P40123 477 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 PDE1BQ01064 536 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 TAB3Q8N5C8 712 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-201ENST00000340748 PCSK9Q8NBP7 692 aaKnown RBP13.78□□□□□ -0.2
DNMT1-201ENST00000340748 KIF9Q9HAQ2 790 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 SEL1LQ9UBV2 794 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 PRR29P0C7W0 189 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 PEX3P56589 373 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 NEDD1Q8NHV4 660 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 GANCQ8TET4 914 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 ZDHHC15Q96MV8 337 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 FMO2Q99518 471 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 KIF2CQ99661 725 aa13.78□□□□□ -0.2
DNMT1-201ENST00000340748 SYNJ2BP-COX16A0A087WUM0 186 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 TRIM49BA6NDI0 452 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 PODXLO00592 558 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 APLP1P51693 650 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 KRT76Q01546 638 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 QRICH1Q2TAL8 776 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 C12orf60Q5U649 245 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 ABCB6Q9NP58 842 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 COX16Q9P0S2 106 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 UBR1Q8IWV7 1749 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 WDR64B1ANS9 1081 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 HMGB1P1B2RPK0 211 aaPredicted RBP13.77□□□□□ -0.2
DNMT1-201ENST00000340748 SART1O43290 800 aaKnown RBP13.77□□□□□ -0.2
DNMT1-201ENST00000340748 TOMM70O94826 608 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 DARS2Q6PI48 645 aaKnown RBP13.77□□□□□ -0.2
DNMT1-201ENST00000340748 ADGRF4Q8IZF3 695 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 NXF1Q9UBU9 619 aaKnown RBP13.77□□□□□ -0.2
DNMT1-201ENST00000340748 ADGRB2O60241 1585 aa13.77□□□□□ -0.2
DNMT1-201ENST00000340748 TXNDC9O14530 226 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 CXCL11O14625 94 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 PRPSAP2O60256 369 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 ASPHQ12797 758 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 MUM1L1Q5H9M0 696 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 SWSAP1Q6NVH7 229 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 PDLIM2Q96JY6 352 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 NDUFB10O96000 172 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 SFNP31947 248 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 USP11P51784 963 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 ARID5BQ14865 1188 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 USP17L6PQ6QN14 398 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 THEM5Q8N1Q8 247 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 XXYLT1Q8NBI6 393 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 ZMYND12Q9H0C1 365 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 GGPS1O95749 300 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 LIG3P49916 1009 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 BACE1P56817 501 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 KNOP1Q1ED39 458 aaKnown RBP13.77□□□□□ -0.21
DNMT1-201ENST00000340748 TTC19Q6DKK2 380 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-201ENST00000340748 OR6B2Q6IFH4 312 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 SHC4Q6S5L8 630 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 PADI6Q6TGC4 694 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 RHPN2Q8IUC4 686 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 GUF1Q8N442 669 aaKnown RBP13.77□□□□□ -0.21
DNMT1-201ENST00000340748 TMEM39AQ9NV64 488 aa13.77□□□□□ -0.21
DNMT1-201ENST00000340748 SYNGAP1Q96PV0 1343 aa13.76□□□□□ -0.21
DNMT1-201ENST00000340748 A0A1W2PQC6 194 aa13.76□□□□□ -0.21
DNMT1-201ENST00000340748 GOLGA8IPA6NC78 632 aa13.76□□□□□ -0.21
DNMT1-201ENST00000340748 GOLGA8JA6NMD2 632 aa13.76□□□□□ -0.21
DNMT1-201ENST00000340748 ADCY2Q08462 1091 aa13.76□□□□□ -0.21
DNMT1-201ENST00000340748 TMED2Q15363 201 aa13.76□□□□□ -0.21
DNMT1-201ENST00000340748 C6orf118Q5T5N4 469 aa13.76□□□□□ -0.21
DNMT1-201ENST00000340748 STOX1Q6ZVD7 989 aa13.76□□□□□ -0.21
DNMT1-201ENST00000340748 TNS4Q8IZW8 715 aa13.76□□□□□ -0.21
DNMT1-201ENST00000340748 PIGOQ8TEQ8 1089 aa13.76□□□□□ -0.21
DNMT1-201ENST00000340748 ZC3H15Q8WU90 426 aaKnown RBP13.76□□□□□ -0.21
DNMT1-201ENST00000340748 FAM149B1Q96BN6 582 aa13.76□□□□□ -0.21
DNMT1-201ENST00000340748 NCAPGQ9BPX3 1015 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms