RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 BMPR1AP36894 532 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 PRPHP41219 470 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 DNM2P50570 870 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 POLGP54098 1239 aaPredicted RBP17.17■□□□□ 0.34
VAPA-201ENST00000340541 PDIA5Q14554 519 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 DSC3Q14574 896 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 EMC2Q15006 297 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 KSR1Q8IVT5 923 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.17■□□□□ 0.34
VAPA-201ENST00000340541 PIGOQ8TEQ8 1089 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 CLP1Q92989 425 aaKnown RBP17.17■□□□□ 0.34
VAPA-201ENST00000340541 TMEM143Q96AN5 459 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 EPHX3Q9H6B9 360 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 BMP2KQ9NSY1 1161 aaPredicted RBP17.17■□□□□ 0.34
VAPA-201ENST00000340541 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 RALGAPA2Q2PPJ7 1873 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 A0A087WZ62 844 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 GRXCR2A6NFK2 248 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 KCNA5P22460 613 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 HOXD11P31277 338 aaPredicted RBP17.16■□□□□ 0.34
VAPA-201ENST00000340541 CDC42EP1Q00587 391 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 ECM1Q16610 540 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 TMEM31Q5JXX7 168 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 POTEGQ6S5H5 508 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 BRAPQ7Z569 592 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 FERMT3Q86UX7 667 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 ZNF410Q86VK4 478 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 RHPN2Q8IUC4 686 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 EXOC8Q8IYI6 725 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 ERMNQ8TAM6 284 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 PRPF31Q8WWY3 499 aaKnown RBP17.16■□□□□ 0.34
VAPA-201ENST00000340541 NLRP7Q8WX94 980 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 ZNF689Q96CS4 500 aaPredicted RBP17.16■□□□□ 0.34
VAPA-201ENST00000340541 PABPC5Q96DU9 382 aaKnown RBP17.16■□□□□ 0.34
VAPA-201ENST00000340541 FDXACB1Q9BRP7 624 aaPredicted RBP17.16■□□□□ 0.34
VAPA-201ENST00000340541 C11orf84Q9BUA3 381 aaPredicted RBP17.16■□□□□ 0.34
VAPA-201ENST00000340541 NSUN3Q9H649 340 aaKnown RBP17.16■□□□□ 0.34
VAPA-201ENST00000340541 LRWD1Q9UFC0 647 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 FAM50BQ9Y247 325 aa17.16■□□□□ 0.34
VAPA-201ENST00000340541 VPS37CA5D8V6 355 aaPredicted RBP17.15■□□□□ 0.34
VAPA-201ENST00000340541 GAS2O43903 313 aaKnown RBP17.15■□□□□ 0.34
VAPA-201ENST00000340541 CSDE1O75534 798 aaKnown RBP17.15■□□□□ 0.34
VAPA-201ENST00000340541 ODR4Q5SWX8 454 aa17.15■□□□□ 0.34
VAPA-201ENST00000340541 PTCRAQ6ISU1 281 aaPredicted RBP17.15■□□□□ 0.34
VAPA-201ENST00000340541 ADAM2Q99965 735 aa17.15■□□□□ 0.34
VAPA-201ENST00000340541 LRFN3Q9BTN0 628 aa17.15■□□□□ 0.34
VAPA-201ENST00000340541 PLVAPQ9BX97 442 aa17.15■□□□□ 0.34
VAPA-201ENST00000340541 IFT122Q9HBG6 1241 aa17.15■□□□□ 0.34
VAPA-201ENST00000340541 RGS18Q9NS28 235 aa17.15■□□□□ 0.34
VAPA-201ENST00000340541 DBR1Q9UK59 544 aaKnown RBP17.15■□□□□ 0.34
VAPA-201ENST00000340541 MTMR6Q9Y217 621 aa17.15■□□□□ 0.34
VAPA-201ENST00000340541 COL4A3BPQ9Y5P4 624 aa17.15■□□□□ 0.34
VAPA-201ENST00000340541 PP2D1A8MPX8 630 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 C9IYK1 514 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 DGAT1O75907 488 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 DGKIO75912 1065 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 LINC00271P0C7V0 271 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 MUTP22033 750 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 FGFR4P22455 802 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 PLA2G5P39877 138 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 SARSP49591 514 aaKnown RBP17.14■□□□□ 0.33
VAPA-201ENST00000340541 LAMTOR4Q0VGL1 99 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 RESTQ13127 1097 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 NAALADL2Q58DX5 795 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 HAUS3Q68CZ6 603 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 DTHD1Q6ZMT9 781 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 NPAS4Q8IUM7 802 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 GJD3Q8N144 294 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 PSPC1Q8WXF1 523 aaKnown RBP17.14■□□□□ 0.33
VAPA-201ENST00000340541 NLRP4Q96MN2 994 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 SCLT1Q96NL6 688 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 NACC1Q96RE7 527 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 MTRQ99707 1265 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 MMTAG2Q9BU76 263 aaKnown RBP17.14■□□□□ 0.33
VAPA-201ENST00000340541 GCOM2Q9BZD3 368 aaPredicted RBP17.14■□□□□ 0.33
VAPA-201ENST00000340541 ADGRA3Q8IWK6 1321 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 NLRC5Q86WI3 1866 aa17.14■□□□□ 0.33
VAPA-201ENST00000340541 CDC25AP30304 524 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 CTNNB1P35222 781 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 ARL2P36404 184 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 CCT6AP40227 531 aaKnown RBP17.13■□□□□ 0.33
VAPA-201ENST00000340541 FAM189BP81408 668 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 TCEAL5Q5H9L2 206 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 ARL6IP4Q66PJ3 421 aaKnown RBP17.13■□□□□ 0.33
VAPA-201ENST00000340541 SLC24A5Q71RS6 500 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 HSCBQ8IWL3 235 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 TCP11Q8WWU5 503 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 P2RX5Q93086 422 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 RAB34Q9BZG1 259 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 ATP6V0A4Q9HBG4 840 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 CD320Q9NPF0 282 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 C1orf112Q9NSG2 853 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 PRKAG3Q9UGI9 489 aa17.13■□□□□ 0.33
VAPA-201ENST00000340541 DENND3A2RUS2 1198 aa17.12■□□□□ 0.33
VAPA-201ENST00000340541 STAG3L1P0CL83 205 aa17.12■□□□□ 0.33
VAPA-201ENST00000340541 BTG3Q14201 252 aaPredicted RBP17.12■□□□□ 0.33
VAPA-201ENST00000340541 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
VAPA-201ENST00000340541 SNX29Q8TEQ0 813 aa17.12■□□□□ 0.33
VAPA-201ENST00000340541 FAM122AQ96E09 287 aa17.12■□□□□ 0.33
VAPA-201ENST00000340541 MINDY3Q9H8M7 445 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms