RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 BEND3Q5T5X7 828 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 CYP4A22Q5TCH4 519 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 DTHD1Q6ZMT9 781 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PRR23BQ6ZRT6 265 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 NOP9Q86U38 636 aaKnown RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 HORMAD1Q86X24 394 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 ERICH1Q86X53 443 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PASD1Q8IV76 773 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 CMTM5Q96DZ9 223 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PPP1R13BQ96KQ4 1090 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 GINS4Q9BRT9 223 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 SLC52A2Q9HAB3 445 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 DBR1Q9UK59 544 aaKnown RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 MRC1P22897 1456 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 TAF4O00268 1085 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 FOSL2P15408 326 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PHKG2P15735 406 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PDE6AP16499 860 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 HPDP32754 393 aaPredicted RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 CCT8P50990 548 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PEX6Q13608 980 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 GNASQ5JWF2 1037 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 ZNF544Q6NX49 715 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 MIS18BP1Q6P0N0 1132 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 ZNF467Q7Z7K2 595 aaPredicted RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 CCDC13Q8IYE1 715 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 BCAS4Q8TDM0 211 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 DDI1Q8WTU0 396 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PGBD4Q96DM1 585 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 NAT9Q9BTE0 207 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 AMNQ9BXJ7 453 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 MRPL47Q9HD33 250 aaKnown RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PCDH10Q9P2E7 1040 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 USP18Q9UMW8 372 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 BCORQ6W2J9 1755 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PDE4DIPQ5VU43 2346 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 TLL1O43897 1013 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 CDC25BP30305 580 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 ATN1P54259 1190 aaPredicted RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 RPS6KA2Q15349 733 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PPP1R7Q15435 360 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 KSR2Q6VAB6 950 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 CENPUQ71F23 418 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 RGL4Q8IZJ4 473 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 MRPL50Q8N5N7 158 aaKnown RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 ZBTB9Q96C00 473 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 FAM210AQ96ND0 272 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 KIAA1586Q9HCI6 787 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 RPRD1BQ9NQG5 326 aaKnown RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 CACNA2D2Q9NY47 1150 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 COPG2Q9UBF2 871 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 RPL26L1Q9UNX3 145 aaKnown RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 MRFAP1Q9Y605 127 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 ZNF804BA4D1E1 1349 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 KIAA0100Q14667 2235 aaKnown RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 COL1A1P02452 1464 aaPredicted RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 H0YC42 278 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 H3BMM5 538 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PRRG1O14668 218 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 DEXIO95424 95 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PARNO95453 639 aaKnown RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 FLIIQ13045 1269 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 MUM1Q2TAK8 710 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PPP4R4Q6NUP7 873 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 RAB44Q7Z6P3 723 aaPredicted RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 TADA2BQ86TJ2 420 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 C8orf58Q8NAV2 365 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 FBXO22Q8NEZ5 403 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 BRF1Q92994 677 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 VPS33AQ96AX1 596 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 MFSD14AQ96MC6 490 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 SYT17Q9BSW7 474 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 CARD9Q9H257 536 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 USP17L10C9JJH3 530 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PQBP1O60828 265 aaKnown RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 KRT37O76014 449 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 FAM13AO94988 1023 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 FOSP01100 380 aaPredicted RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 HOXB8P17481 243 aaPredicted RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 DNAJB2P25686 324 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 TKTP29401 623 aaKnown RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 ALDH1A3P47895 512 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 LBX1P52954 281 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 EPHB4P54760 987 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 ADCY2Q08462 1091 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 NDUFA5Q16718 116 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 CCDC80Q76M96 950 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 RYBPQ8N488 228 aaPredicted RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 MB21D1Q8N884 522 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 TINF2Q9BSI4 451 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 IL1RAPL1Q9NZN1 696 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 CDV3Q9UKY7 258 aaKnown RBP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.51□□□□□ -1.85
CSMD3-202ENST00000339701 PAPPAQ13219 1627 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 C1orf167Q5SNV9 1468 aa3.51□□□□□ -1.85
CSMD3-202ENST00000339701 SRRM3A6NNA2 597 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ZNF839A8K0R7 811 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 VGLL3A8MV65 326 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 BTBD18B2RXH4 712 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms