RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 RSPH1Q8WYR4 309 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 PPP1R14BQ96C90 147 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 GPR101Q96P66 508 aaPredicted RBP10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 TGS1Q96RS0 853 aaKnown RBP10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 PACSIN1Q9BY11 444 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 LRRC27Q9C0I9 530 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 USP29Q9HBJ7 922 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 SEC63Q9UGP8 760 aaKnown RBP10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 DBNLQ9UJU6 430 aaKnown RBP10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 RTCBQ9Y3I0 505 aaKnown RBP10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 FAM32AQ9Y421 112 aaKnown RBP10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 TMEM120BA0PK00 339 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 POTEFA5A3E0 1075 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 TIMM44O43615 452 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 LDHCP07864 332 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 LMNB1P20700 586 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 ANTXR2P58335 489 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 CYLC2Q14093 348 aaPredicted RBP10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 PARP6Q2NL67 630 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 AGGF1Q8N302 714 aaeCLIP10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 FNDC8Q8TC99 324 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 IQCDQ96DY2 449 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 LUC7LQ9NQ29 371 aaKnown RBP10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 STX8Q9UNK0 236 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 FRMD4BQ9Y2L6 1034 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 STRCQ7RTU9 1775 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 XDHP47989 1333 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 TRIM64CA6NLI5 447 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 WNT7AO00755 349 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 RANBP6O60518 1105 aaKnown RBP10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 HSPD1P10809 573 aaKnown RBP10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 HSPA8P11142 646 aaKnown RBP10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 RELAQ04206 551 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 SLC34A1Q06495 639 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 DCTN2Q13561 401 aaKnown RBP10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 CUL1Q13616 776 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 EXOC3L4Q17RC7 722 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 TDRD12Q587J7 1177 aaKnown RBP10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 C4orf50Q6ZRC1 276 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 FAM186BQ8IYM0 893 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 FBXO41Q8TF61 875 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 TRIM47Q96LD4 638 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 SLC26A6Q9BXS9 759 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 LIN28AQ9H9Z2 209 aaKnown RBP10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 TRPC7Q9HCX4 862 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 SYNPO2Q9UMS6 1093 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 LZTS1Q9Y250 596 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 ARHGEF10O15013 1369 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 MROH7Q68CQ1 1323 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 VILLO15195 856 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 DGKIO75912 1065 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 LCA5LO95447 670 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 IDO1P14902 403 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 GTF2H1P32780 548 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 SPAG1Q07617 926 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 MPP2Q14168 576 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 FXNQ16595 210 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 DENND2CQ68D51 928 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 PEX5LQ8IYB4 626 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 DIS3L2Q8IYB7 885 aaKnown RBP10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 ARHGAP24Q8N264 748 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 NME8Q8N427 588 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 MARCH10Q8NA82 808 aaPredicted RBP10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 NACC2Q96BF6 587 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 FMO2Q99518 471 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 CDK19Q9BWU1 502 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 CUEDC2Q9H467 287 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 FAIMQ9NVQ4 179 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 CHPF2Q9P2E5 772 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 STK24Q9Y6E0 443 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 STK36Q9NRP7 1315 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 FOXD2O60548 495 aaPredicted RBP10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 PSMG1O95456 288 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 BAG2O95816 211 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 PABPC4LP0CB38 370 aaKnown RBP10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 AMPD1P23109 780 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 KLRC1P26715 233 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 ARID5AQ03989 594 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 AP1B1Q10567 949 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 PPP2R5BQ15173 497 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 LONRF1Q17RB8 773 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 USH1GQ495M9 461 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 WASHC2DQ5SRD0 308 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 KLHDC10Q6PID8 442 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 VASH1Q7L8A9 365 aaPredicted RBP10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 PATL1Q86TB9 770 aaKnown RBP10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 NOSTRINQ8IVI9 506 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 ANKK1Q8NFD2 765 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 GIPC3Q8TF64 312 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 OLFM3Q96PB7 478 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 DBNDD2Q9BQY9 259 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 ZMYND12Q9H0C1 365 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 CEP126Q9P2H0 1117 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 RWDD2AQ9UIY3 292 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 MOSPD1Q9UJG1 213 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 NUMBLQ9Y6R0 609 aa10.36□□□□□ -0.75
PTCHD4-201ENST00000339488 ANKRD26Q9UPS8 1709 aa10.35□□□□□ -0.75
PTCHD4-201ENST00000339488 PDS5AQ29RF7 1337 aaKnown RBP10.35□□□□□ -0.75
PTCHD4-201ENST00000339488 STT3AP46977 705 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms