RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 SCLYQ96I15 445 aa15.59■□□□□ 0.09
APOBEC3B-202ENST00000335760 IFT74Q96LB3 600 aa15.59■□□□□ 0.09
APOBEC3B-202ENST00000335760 TIGD1Q96MW7 591 aa15.59■□□□□ 0.09
APOBEC3B-202ENST00000335760 OSMRQ99650 979 aa15.59■□□□□ 0.09
APOBEC3B-202ENST00000335760 C7orf25Q9BPX7 421 aa15.59■□□□□ 0.09
APOBEC3B-202ENST00000335760 TRIM9Q9C026 710 aa15.59■□□□□ 0.09
APOBEC3B-202ENST00000335760 WNT8AQ9H1J5 351 aa15.59■□□□□ 0.09
APOBEC3B-202ENST00000335760 ADAMTS10Q9H324 1103 aa15.59■□□□□ 0.09
APOBEC3B-202ENST00000335760 CDHR5Q9HBB8 845 aa15.59■□□□□ 0.09
APOBEC3B-202ENST00000335760 DACT1Q9NYF0 836 aa15.59■□□□□ 0.09
APOBEC3B-202ENST00000335760 PCDH10Q9P2E7 1040 aa15.59■□□□□ 0.09
APOBEC3B-202ENST00000335760 NR2E3Q9Y5X4 410 aa15.59■□□□□ 0.09
APOBEC3B-202ENST00000335760 A0A087WZ62 844 aa15.58■□□□□ 0.08
APOBEC3B-202ENST00000335760 IDEP14735 1019 aa15.58■□□□□ 0.08
APOBEC3B-202ENST00000335760 PEX3P56589 373 aa15.58■□□□□ 0.08
APOBEC3B-202ENST00000335760 ASIC1P78348 528 aa15.58■□□□□ 0.08
APOBEC3B-202ENST00000335760 CUL4BQ13620 913 aa15.58■□□□□ 0.08
APOBEC3B-202ENST00000335760 PPP2R5AQ15172 486 aa15.58■□□□□ 0.08
APOBEC3B-202ENST00000335760 ZNF410Q86VK4 478 aa15.58■□□□□ 0.08
APOBEC3B-202ENST00000335760 ZNF710Q8N1W2 664 aa15.58■□□□□ 0.08
APOBEC3B-202ENST00000335760 RNF149Q8NC42 400 aa15.58■□□□□ 0.08
APOBEC3B-202ENST00000335760 FDXACB1Q9BRP7 624 aaPredicted RBP15.58■□□□□ 0.08
APOBEC3B-202ENST00000335760 LRRIQ4A6NIV6 560 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 GTPBP6O43824 516 aaPredicted RBP15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 PRR29P0C7W0 189 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 PLS3P13797 630 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 NAMPTP43490 491 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 MFSD5Q6N075 450 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 CNNM4Q6P4Q7 775 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 TMEM199Q8N511 208 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 MYCT1Q8N699 235 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 GCOM2Q9BZD3 368 aaPredicted RBP15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 C17orf75Q9HAS0 396 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 PARVGQ9HBI0 331 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 PANK4Q9NVE7 773 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 TANC1Q9C0D5 1861 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 SIP14410 1827 aa15.57■□□□□ 0.08
APOBEC3B-202ENST00000335760 MYH11P35749 1972 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 CCDC169A6NNP5 214 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 RBAK-RBAKDNI3L0D1 243 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 PHKA2P46019 1235 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 NPTX2P47972 431 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 ZNF131P52739 623 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 DMP1Q13316 513 aaPredicted RBP15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 LPIN1Q14693 890 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 MBTPS1Q14703 1052 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 FBXO47Q5MNV8 452 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 ODR4Q5SWX8 454 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 CCDC65Q8IXS2 484 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 DEPTORQ8TB45 409 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 GPT2Q8TD30 523 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 TMEM40Q8WWA1 233 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 BADQ92934 168 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 OSBPL7Q9BZF2 842 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 IFT122Q9HBG6 1241 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 KMT5AQ9NQR1 393 aa15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 LARSQ9P2J5 1176 aaKnown RBP15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 HOOK1Q9UJC3 728 aaKnown RBP15.56■□□□□ 0.08
APOBEC3B-202ENST00000335760 FRMD3A2A2Y4 597 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 NBNO60934 754 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 PARNO95453 639 aaKnown RBP15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 MYL1P05976 194 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 GHRP10912 638 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 DARSP14868 501 aaKnown RBP15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 CSF2RAP15509 400 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 GAP43P17677 238 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 EIF4BP23588 611 aaKnown RBP15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 RFC2P35250 354 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 PTENP60484 403 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 MDM2Q00987 491 aaPredicted RBP15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 POU5F1BQ06416 359 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 GPNMBQ14956 572 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 POSTNQ15063 836 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 HERC4Q5GLZ8 1057 aaPredicted RBP15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 DEFB128Q7Z7B8 93 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 SFR1Q86XK3 245 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 ZBTB8OSQ8IWT0 167 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 SPIRE2Q8WWL2 714 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 LBHD1Q9BQE6 289 aaPredicted RBP15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 KIFC3Q9BVG8 833 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 KCNG1Q9UIX4 513 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 NOC2LQ9Y3T9 749 aaKnown RBP15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 LTBP2Q14767 1821 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 SCN5AQ14524 2016 aa15.55■□□□□ 0.08
APOBEC3B-202ENST00000335760 SLC16A4O15374 487 aa15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 TRAK2O60296 914 aa15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 CSDE1O75534 798 aaKnown RBP15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 RPS6KA5O75582 802 aa15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 MBD3O95983 291 aa15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 FGFR4P22455 802 aa15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 SMTNP53814 917 aa15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 MLLT1Q03111 559 aaPredicted RBP15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 DPYDQ12882 1025 aa15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 PNOCQ13519 176 aa15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 UNC13DQ70J99 1090 aa15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 SRGAP1Q7Z6B7 1085 aa15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 IFNLR1Q8IU57 520 aaPredicted RBP15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 ELOA2Q8IYF1 753 aaPredicted RBP15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 NTPCRQ9BSD7 190 aaKnown RBP15.54■□□□□ 0.08
APOBEC3B-202ENST00000335760 NFKBIZQ9BYH8 718 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms