RNA–Protein interactions for RNA: ENST00000335005.10

ITM2C-203, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-203ENST00000335005 LNX1Q8TBB1 728 aaPredicted RBP25.51■■□□□ 1.67
ITM2C-203ENST00000335005 VTI1AQ96AJ9 217 aa25.51■■□□□ 1.67
ITM2C-203ENST00000335005 RPAP3Q9H6T3 665 aaPredicted RBP25.51■■□□□ 1.67
ITM2C-203ENST00000335005 VPS18Q9P253 973 aa25.51■■□□□ 1.67
ITM2C-203ENST00000335005 TMEM59LQ9UK28 342 aa25.51■■□□□ 1.67
ITM2C-203ENST00000335005 FAN1Q9Y2M0 1017 aa25.51■■□□□ 1.67
ITM2C-203ENST00000335005 NCANO14594 1321 aa25.51■■□□□ 1.67
ITM2C-203ENST00000335005 KIAA1217Q5T5P2 1943 aa25.51■■□□□ 1.67
ITM2C-203ENST00000335005 PMM2O15305 246 aa25.51■■□□□ 1.67
ITM2C-203ENST00000335005 SYF2O95926 243 aaKnown RBP25.51■■□□□ 1.67
ITM2C-203ENST00000335005 EIF2AK2P19525 551 aaKnown RBP25.51■■□□□ 1.67
ITM2C-203ENST00000335005 YWHABP31946 246 aaKnown RBP25.51■■□□□ 1.67
ITM2C-203ENST00000335005 KRT76Q01546 638 aa25.51■■□□□ 1.67
ITM2C-203ENST00000335005 SF3B2Q13435 895 aaKnown RBP25.51■■□□□ 1.67
ITM2C-203ENST00000335005 RPS6KA1Q15418 735 aa25.51■■□□□ 1.67
ITM2C-203ENST00000335005 GSPT2Q8IYD1 628 aaKnown RBP25.51■■□□□ 1.67
ITM2C-203ENST00000335005 ANKEF1Q9NU02 776 aa25.51■■□□□ 1.67
ITM2C-203ENST00000335005 SCAF8Q9UPN6 1271 aaKnown RBP25.51■■□□□ 1.67
ITM2C-203ENST00000335005 CLSTN1O94985 981 aa25.5■■□□□ 1.67
ITM2C-203ENST00000335005 KRT13P13646 458 aa25.5■■□□□ 1.67
ITM2C-203ENST00000335005 PSMC5P62195 406 aa25.5■■□□□ 1.67
ITM2C-203ENST00000335005 DGKZQ13574 1117 aa25.5■■□□□ 1.67
ITM2C-203ENST00000335005 DEFB132Q7Z7B7 95 aa25.5■■□□□ 1.67
ITM2C-203ENST00000335005 LMBR1Q8WVP7 490 aa25.5■■□□□ 1.67
ITM2C-203ENST00000335005 TAF4BQ92750 862 aa25.5■■□□□ 1.67
ITM2C-203ENST00000335005 CAVIN3Q969G5 261 aa25.5■■□□□ 1.67
ITM2C-203ENST00000335005 TRERF1Q96PN7 1200 aa25.5■■□□□ 1.67
ITM2C-203ENST00000335005 GDF3Q9NR23 364 aa25.5■■□□□ 1.67
ITM2C-203ENST00000335005 HOMER2Q9NSB8 354 aa25.5■■□□□ 1.67
ITM2C-203ENST00000335005 USP20Q9Y2K6 914 aa25.5■■□□□ 1.67
ITM2C-203ENST00000335005 WDR64B1ANS9 1081 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 VWA5AO00534 786 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 MATR3P43243 847 aaKnown RBP eCLIP25.49■■□□□ 1.67
ITM2C-203ENST00000335005 NCKAP1LP55160 1127 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 NNTQ13423 1086 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 KIF22Q14807 665 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 RNF207Q6ZRF8 634 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 USP38Q8NB14 1042 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 IWS1Q96ST2 819 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 RMDN3Q96TC7 470 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 ZNF112Q9UJU3 913 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 STXBP5LQ9Y2K9 1186 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 SAMM50Q9Y512 469 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 LOC285556D6RIA3 1793 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 LTBP3Q9NS15 1303 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 A0A0U1RQG5 324 aaPredicted RBP25.49■■□□□ 1.67
ITM2C-203ENST00000335005 UGCGQ16739 394 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 ACTRT1Q8TDG2 376 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 U2AF1L4Q8WU68 220 aaKnown RBP25.49■■□□□ 1.67
ITM2C-203ENST00000335005 SENP7Q9BQF6 1050 aa25.49■■□□□ 1.67
ITM2C-203ENST00000335005 PACSIN2Q9UNF0 486 aaPredicted RBP25.49■■□□□ 1.67
ITM2C-203ENST00000335005 CCDC66A2RUB6 948 aa25.48■■□□□ 1.67
ITM2C-203ENST00000335005 GYS2P54840 703 aa25.48■■□□□ 1.67
ITM2C-203ENST00000335005 DCAF15Q66K64 600 aa25.48■■□□□ 1.67
ITM2C-203ENST00000335005 SYCE1Q8N0S2 351 aa25.48■■□□□ 1.67
ITM2C-203ENST00000335005 CTDP1Q9Y5B0 961 aaPredicted RBP25.48■■□□□ 1.67
ITM2C-203ENST00000335005 CCNE2O96020 404 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 TMEM253P0C7T8 217 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 NOP2P46087 812 aaKnown RBP25.47■■□□□ 1.67
ITM2C-203ENST00000335005 OAZ1P54368 228 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 SLC7A5Q01650 507 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 HAUS6Q7Z4H7 955 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 MICALL2Q8IY33 904 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 SCYL3Q8IZE3 742 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 REPS2Q8NFH8 660 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 HVCN1Q96D96 273 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 C12orf42Q96LP6 360 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 SUCLA2Q9P2R7 463 aaPredicted RBP25.47■■□□□ 1.67
ITM2C-203ENST00000335005 HACL1Q9UJ83 578 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 BACH1O14867 736 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 VAMP7P51809 220 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 GALCP54803 685 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 BACE1P56817 501 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 EPC2Q52LR7 807 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 IFT20Q8IY31 132 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 XXYLT1Q8NBI6 393 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 GPRASP2Q96D09 838 aa25.47■■□□□ 1.67
ITM2C-203ENST00000335005 AGPSO00116 658 aa25.46■■□□□ 1.67
ITM2C-203ENST00000335005 ATP9AO75110 1047 aa25.46■■□□□ 1.67
ITM2C-203ENST00000335005 GMPSP49915 693 aaPredicted RBP25.46■■□□□ 1.67
ITM2C-203ENST00000335005 C1orf220Q5T0J3 134 aa25.46■■□□□ 1.67
ITM2C-203ENST00000335005 PHLDB3Q6NSJ2 640 aa25.46■■□□□ 1.67
ITM2C-203ENST00000335005 ZNF746Q6NUN9 644 aaPredicted RBP25.46■■□□□ 1.67
ITM2C-203ENST00000335005 CALR3Q96L12 384 aaKnown RBP25.46■■□□□ 1.67
ITM2C-203ENST00000335005 AS3MTQ9HBK9 375 aa25.46■■□□□ 1.67
ITM2C-203ENST00000335005 HSPBP1Q9NZL4 362 aa25.46■■□□□ 1.67
ITM2C-203ENST00000335005 EMSYQ7Z589 1322 aa25.45■■□□□ 1.67
ITM2C-203ENST00000335005 MAFGO15525 162 aa25.45■■□□□ 1.67
ITM2C-203ENST00000335005 RNF40O75150 1001 aa25.45■■□□□ 1.67
ITM2C-203ENST00000335005 MYCLP12524 364 aaPredicted RBP25.45■■□□□ 1.67
ITM2C-203ENST00000335005 TNNC1P63316 161 aa25.45■■□□□ 1.67
ITM2C-203ENST00000335005 PLS1Q14651 629 aa25.45■■□□□ 1.67
ITM2C-203ENST00000335005 ARHGEF16Q5VV41 709 aa25.45■■□□□ 1.67
ITM2C-203ENST00000335005 SND1Q7KZF4 910 aaKnown RBP eCLIP25.45■■□□□ 1.678e-8■■■□□ 16.9
ITM2C-203ENST00000335005 MAEAQ7L5Y9 396 aa25.45■■□□□ 1.67
ITM2C-203ENST00000335005 RFFLQ8WZ73 363 aa25.45■■□□□ 1.67
ITM2C-203ENST00000335005 ATG4CQ96DT6 458 aa25.45■■□□□ 1.67
ITM2C-203ENST00000335005 CCDC43Q96MW1 224 aaKnown RBP25.45■■□□□ 1.67
ITM2C-203ENST00000335005 CBWD1Q9BRT8 395 aa25.45■■□□□ 1.67
ITM2C-203ENST00000335005 MAF1Q9H063 256 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms