RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 DMP1Q13316 513 aaPredicted RBP23.74■■□□□ 1.39
TPM1-204ENST00000334895 CAPSQ13938 189 aa23.74■■□□□ 1.39
TPM1-204ENST00000334895 FAM47CQ5HY64 1035 aa23.74■■□□□ 1.39
TPM1-204ENST00000334895 SLC43A3Q8NBI5 491 aa23.74■■□□□ 1.39
TPM1-204ENST00000334895 SCFD1Q8WVM8 642 aa23.74■■□□□ 1.39
TPM1-204ENST00000334895 PSPC1Q8WXF1 523 aaKnown RBP23.74■■□□□ 1.39
TPM1-204ENST00000334895 VTI1AQ96AJ9 217 aa23.74■■□□□ 1.39
TPM1-204ENST00000334895 SLC16A4O15374 487 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 MAPTP10636 758 aaKnown RBP23.73■■□□□ 1.39
TPM1-204ENST00000334895 CYP2C9P11712 490 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 LAMTOR4Q0VGL1 99 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 ZC2HC1CQ53FD0 456 aaPredicted RBP23.73■■□□□ 1.39
TPM1-204ENST00000334895 MED15Q96RN5 788 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 GTPBP4Q9BZE4 634 aaKnown RBP23.73■■□□□ 1.39
TPM1-204ENST00000334895 STARD7Q9NQZ5 370 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 SMIM35A0A1B0GVV1 85 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 K7ENM7 598 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 GCNT3O95395 438 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 GNAT1P11488 350 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 HOXD13P35453 343 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 DNM2P50570 870 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 RHPN2Q8IUC4 686 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 GUF1Q8N442 669 aaKnown RBP23.73■■□□□ 1.39
TPM1-204ENST00000334895 TMEM161BQ8NDZ6 487 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 IFT74Q96LB3 600 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 ST6GALNAC4Q9H4F1 302 aa23.73■■□□□ 1.39
TPM1-204ENST00000334895 CCDC169A6NNP5 214 aa23.72■■□□□ 1.39
TPM1-204ENST00000334895 NAMPTP43490 491 aa23.72■■□□□ 1.39
TPM1-204ENST00000334895 KCNA1Q09470 495 aa23.72■■□□□ 1.39
TPM1-204ENST00000334895 MXD4Q14582 209 aaPredicted RBP23.72■■□□□ 1.39
TPM1-204ENST00000334895 BMT2Q1RMZ1 405 aa23.72■■□□□ 1.39
TPM1-204ENST00000334895 FAM49AQ9H0Q0 323 aaPredicted RBP23.72■■□□□ 1.39
TPM1-204ENST00000334895 KMT5AQ9NQR1 393 aa23.72■■□□□ 1.39
TPM1-204ENST00000334895 ARHGAP28Q9P2N2 729 aa23.72■■□□□ 1.39
TPM1-204ENST00000334895 SIP14410 1827 aa23.72■■□□□ 1.39
TPM1-204ENST00000334895 A0A0U1RQG5 324 aaPredicted RBP23.71■■□□□ 1.39
TPM1-204ENST00000334895 PRPF6O94906 941 aaKnown RBP23.71■■□□□ 1.39
TPM1-204ENST00000334895 VTNP04004 478 aa23.71■■□□□ 1.39
TPM1-204ENST00000334895 TMOD1P28289 359 aa23.71■■□□□ 1.39
TPM1-204ENST00000334895 PTPN11Q06124 597 aaPredicted RBP23.71■■□□□ 1.39
TPM1-204ENST00000334895 PPP2R5AQ15172 486 aa23.71■■□□□ 1.39
TPM1-204ENST00000334895 KLHL10Q6JEL2 608 aa23.71■■□□□ 1.39
TPM1-204ENST00000334895 HAUS6Q7Z4H7 955 aa23.71■■□□□ 1.39
TPM1-204ENST00000334895 MYOCDQ8IZQ8 938 aa23.71■■□□□ 1.39
TPM1-204ENST00000334895 WNT8BQ93098 351 aa23.71■■□□□ 1.39
TPM1-204ENST00000334895 ZNF668Q96K58 619 aaPredicted RBP23.71■■□□□ 1.39
TPM1-204ENST00000334895 AKT3Q9Y243 479 aa23.71■■□□□ 1.39
TPM1-204ENST00000334895 EIF3DO15371 548 aaKnown RBP eCLIP23.7■■□□□ 1.39
TPM1-204ENST00000334895 ZNF165P49910 485 aa23.7■■□□□ 1.39
TPM1-204ENST00000334895 SMTNP53814 917 aa23.7■■□□□ 1.39
TPM1-204ENST00000334895 GTF2BQ00403 316 aa23.7■■□□□ 1.39
TPM1-204ENST00000334895 ZNF507Q8TCN5 953 aa23.7■■□□□ 1.39
TPM1-204ENST00000334895 DNAJB3Q8WWF6 145 aa23.7■■□□□ 1.39
TPM1-204ENST00000334895 TRMT13Q9NUP7 481 aaKnown RBP23.7■■□□□ 1.39
TPM1-204ENST00000334895 DACH1Q9UI36 760 aa23.7■■□□□ 1.39
TPM1-204ENST00000334895 CTNND2Q9UQB3 1225 aa23.7■■□□□ 1.39
TPM1-204ENST00000334895 LRRIQ4A6NIV6 560 aa23.7■■□□□ 1.38
TPM1-204ENST00000334895 PMS1P54277 932 aaKnown RBP23.7■■□□□ 1.38
TPM1-204ENST00000334895 TAS1R3Q7RTX0 852 aa23.7■■□□□ 1.38
TPM1-204ENST00000334895 SERINC5Q86VE9 423 aa23.7■■□□□ 1.38
TPM1-204ENST00000334895 NELFCDQ8IXH7 590 aa23.7■■□□□ 1.38
TPM1-204ENST00000334895 RNF149Q8NC42 400 aa23.7■■□□□ 1.38
TPM1-204ENST00000334895 DIS3LQ8TF46 1054 aaKnown RBP23.7■■□□□ 1.38
TPM1-204ENST00000334895 KCNN1Q92952 543 aa23.7■■□□□ 1.38
TPM1-204ENST00000334895 MAP7D2Q96T17 732 aa23.7■■□□□ 1.38
TPM1-204ENST00000334895 PPP1R16BQ96T49 567 aa23.7■■□□□ 1.38
TPM1-204ENST00000334895 IKZF4Q9H2S9 585 aa23.7■■□□□ 1.38
TPM1-204ENST00000334895 SEMA6BQ9H3T3 888 aa23.7■■□□□ 1.38
TPM1-204ENST00000334895 CBX8Q9HC52 389 aa23.7■■□□□ 1.38
TPM1-204ENST00000334895 ALPK3Q96L96 1907 aa23.69■■□□□ 1.38
TPM1-204ENST00000334895 ZMYM2Q9UBW7 1377 aa23.69■■□□□ 1.38
TPM1-204ENST00000334895 ARVCFO00192 962 aa23.69■■□□□ 1.38
TPM1-204ENST00000334895 ASAP2O43150 1006 aa23.69■■□□□ 1.38
TPM1-204ENST00000334895 SRGAP2CP0DJJ0 459 aa23.69■■□□□ 1.38
TPM1-204ENST00000334895 ERCC5P28715 1186 aaPredicted RBP23.69■■□□□ 1.38
TPM1-204ENST00000334895 PTGISQ16647 500 aa23.69■■□□□ 1.38
TPM1-204ENST00000334895 CDCA2Q69YH5 1023 aaPredicted RBP23.69■■□□□ 1.38
TPM1-204ENST00000334895 SLC17A8Q8NDX2 589 aa23.69■■□□□ 1.38
TPM1-204ENST00000334895 NELFBQ8WX92 580 aa23.69■■□□□ 1.38
TPM1-204ENST00000334895 DHTKD1Q96HY7 919 aaPredicted RBP23.69■■□□□ 1.38
TPM1-204ENST00000334895 NLRP4Q96MN2 994 aa23.69■■□□□ 1.38
TPM1-204ENST00000334895 BPIFA3Q9BQP9 254 aa23.69■■□□□ 1.38
TPM1-204ENST00000334895 RBSNQ9H1K0 784 aa23.69■■□□□ 1.38
TPM1-204ENST00000334895 DENND3A2RUS2 1198 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 TRIM49BA6NDI0 452 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 COL6A1P12109 1028 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 CAPN2P17655 700 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 CDK7P50613 346 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 GPC3P51654 580 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 STX17P56962 302 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 PAK1Q13153 545 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 STIM1Q13586 685 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 IQCB1Q15051 598 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 CT47A1Q5JQC4 288 aaPredicted RBP23.68■■□□□ 1.38
TPM1-204ENST00000334895 TAF2Q6P1X5 1199 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 DHX40Q8IX18 779 aaKnown RBP23.68■■□□□ 1.38
TPM1-204ENST00000334895 DEPTORQ8TB45 409 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 FAM200AQ8TCP9 573 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 NAT10Q9H0A0 1025 aaKnown RBP23.68■■□□□ 1.38
TPM1-204ENST00000334895 KCTD10Q9H3F6 313 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms