RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 STMN4Q9H169 189 aaPredicted RBP14.83□□□□□ -0.03
SYNE3-201ENST00000334258 KCTD10Q9H3F6 313 aa14.83□□□□□ -0.03
SYNE3-201ENST00000334258 CASZ1Q86V15 1759 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 POLRMTO00411 1230 aaKnown RBP14.83□□□□□ -0.04
SYNE3-201ENST00000334258 RXRBP28702 533 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 ADCY2Q08462 1091 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 NUGGCQ68CJ6 796 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 CAPRIN2Q6IMN6 1127 aaKnown RBP14.83□□□□□ -0.04
SYNE3-201ENST00000334258 TAOK1Q7L7X3 1001 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 CEP95Q96GE4 821 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 ERVK-5Q9HDB9 667 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 TCP11X1B4DZS4 312 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 SUN1O94901 812 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 HOXA7P31268 230 aaPredicted RBP14.83□□□□□ -0.04
SYNE3-201ENST00000334258 RIPK1Q13546 671 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 DUPD1Q68J44 220 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 SEC14L1Q92503 715 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 FAM167BQ9BTA0 163 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 ANKRD2Q9GZV1 360 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 KIF9Q9HAQ2 790 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 STXBP5LQ9Y2K9 1186 aa14.83□□□□□ -0.04
SYNE3-201ENST00000334258 CLIC2O15247 247 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 AGTP01019 485 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 NUDT17P0C025 328 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 CDK8P49336 464 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 CASP5P51878 434 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 LACTBP83111 547 aaPredicted RBP14.82□□□□□ -0.04
SYNE3-201ENST00000334258 PPP2R5EQ16537 467 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 FOXR2Q6PJQ5 311 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 POTEAQ6S8J7 498 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 SLFN11Q7Z7L1 901 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 SPICE1Q8N0Z3 855 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 MAB21L3Q8N8X9 362 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 C18orf8Q96DM3 657 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 ADAM7Q9H2U9 754 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 DBNDD1Q9H9R9 158 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 HOMER3Q9NSC5 361 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 PPP1R1BQ9UD71 204 aaPredicted RBP14.82□□□□□ -0.04
SYNE3-201ENST00000334258 PTPN22Q9Y2R2 807 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 USP15Q9Y4E8 981 aaPredicted RBP14.82□□□□□ -0.04
SYNE3-201ENST00000334258 RAD21O60216 631 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 MARSP56192 900 aaKnown RBP14.82□□□□□ -0.04
SYNE3-201ENST00000334258 MFSD14BQ5SR56 506 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 KCNV2Q8TDN2 545 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 IFT74Q96LB3 600 aa14.82□□□□□ -0.04
SYNE3-201ENST00000334258 ENO4A6NNW6 628 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 A8MUI8 341 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 G3V3G9 751 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 SNX3O60493 162 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 NCALDP61601 193 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 ATP11AP98196 1134 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 ZNF268Q14587 947 aaPredicted RBP14.81□□□□□ -0.04
SYNE3-201ENST00000334258 EDRF1Q3B7T1 1238 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 DCAF8Q5TAQ9 597 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 AADACL2Q6P093 401 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 LRRC47Q8N1G4 583 aaKnown RBP14.81□□□□□ -0.04
SYNE3-201ENST00000334258 ZNF483Q8TF39 744 aaPredicted RBP14.81□□□□□ -0.04
SYNE3-201ENST00000334258 ZDHHC18Q9NUE0 388 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 AJAP1Q9UKB5 411 aaPredicted RBP14.81□□□□□ -0.04
SYNE3-201ENST00000334258 PCDHAC2Q9Y5I4 1007 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 FAM187AA6NFU0 413 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 MEIS1O00470 390 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 EVI5O60447 810 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 FERP16591 822 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 PLCG2P16885 1265 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 CYP11B2P19099 503 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 POU5F1Q01860 360 aaKnown RBP14.81□□□□□ -0.04
SYNE3-201ENST00000334258 MAPK7Q13164 816 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 PABPC4Q13310 644 aaKnown RBP eCLIP14.81□□□□□ -0.04
SYNE3-201ENST00000334258 UBAP2Q5T6F2 1119 aaKnown RBP14.81□□□□□ -0.04
SYNE3-201ENST00000334258 PPP4R3CPQ6ZMV5 832 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 FRMD5Q7Z6J6 570 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 PARD3BQ8TEW8 1205 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 RFFLQ8WZ73 363 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 HAS1Q92839 578 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 EPB41L4BQ9H329 900 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 GGA1Q9UJY5 639 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 KDM3AQ9Y4C1 1321 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 CACNA1SQ13698 1873 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 LRP5O75197 1615 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 A0A0A6YYK5 440 aaPredicted RBP14.81□□□□□ -0.04
SYNE3-201ENST00000334258 BHMG1C9JSJ3 638 aaPredicted RBP14.81□□□□□ -0.04
SYNE3-201ENST00000334258 AKAP3O75969 853 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 PRKCIP41743 596 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 CACNB3P54284 484 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 KLRC3Q07444 240 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 LLGL1Q15334 1064 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 TRIM68Q6AZZ1 485 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 GDAP1Q8TB36 358 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 SAAL1Q96ER3 474 aa14.81□□□□□ -0.04
SYNE3-201ENST00000334258 ESYT2A0FGR8 921 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 POTEFA5A3E0 1075 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 KIAA0391O15091 583 aaKnown RBP14.8□□□□□ -0.04
SYNE3-201ENST00000334258 POTEIP0CG38 1075 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 CCND1P24385 295 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 STAT3P40763 770 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 CASP4P49662 377 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
SYNE3-201ENST00000334258 KNOP1Q1ED39 458 aaKnown RBP14.8□□□□□ -0.04
SYNE3-201ENST00000334258 POTEGQ6S5H5 508 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms