RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 A0A087WZ62 844 aa22.73■■□□□ 1.23
MRPL40-201ENST00000333130 SRGAP2CP0DJJ0 459 aa22.73■■□□□ 1.23
MRPL40-201ENST00000333130 DARSP14868 501 aaKnown RBP22.73■■□□□ 1.23
MRPL40-201ENST00000333130 E2F4Q16254 413 aa22.73■■□□□ 1.23
MRPL40-201ENST00000333130 SYT2Q8N9I0 419 aaPredicted RBP22.73■■□□□ 1.23
MRPL40-201ENST00000333130 RNF149Q8NC42 400 aa22.73■■□□□ 1.23
MRPL40-201ENST00000333130 LARP4BQ92615 738 aaKnown RBP22.73■■□□□ 1.23
MRPL40-201ENST00000333130 RAD54LQ92698 747 aa22.73■■□□□ 1.23
MRPL40-201ENST00000333130 ZNF668Q96K58 619 aaPredicted RBP22.73■■□□□ 1.23
MRPL40-201ENST00000333130 IFT74Q96LB3 600 aa22.73■■□□□ 1.23
MRPL40-201ENST00000333130 DRC1Q96MC2 740 aa22.73■■□□□ 1.23
MRPL40-201ENST00000333130 FDXACB1Q9BRP7 624 aaPredicted RBP22.73■■□□□ 1.23
MRPL40-201ENST00000333130 NOC2LQ9Y3T9 749 aaKnown RBP22.73■■□□□ 1.23
MRPL40-201ENST00000333130 AMHP03971 560 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 PFKFB1P16118 471 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 ARL2P36404 184 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 STAT6P42226 847 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 SLC12A3P55017 1021 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 LRIT3Q3SXY7 679 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 RASIP1Q5U651 963 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 SRGAP1Q7Z6B7 1085 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 KSR1Q8IVT5 923 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 TMEM40Q8WWA1 233 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 MRPS27Q92552 414 aaKnown RBP22.72■■□□□ 1.23
MRPL40-201ENST00000333130 PYM1Q9BRP8 204 aaKnown RBP22.72■■□□□ 1.23
MRPL40-201ENST00000333130 AGO3Q9H9G7 860 aaKnown RBP22.72■■□□□ 1.23
MRPL40-201ENST00000333130 CDHR5Q9HBB8 845 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 RNF216Q9NWF9 866 aaPredicted RBP22.72■■□□□ 1.23
MRPL40-201ENST00000333130 KCNH3Q9ULD8 1083 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 ST3GAL5Q9UNP4 418 aa22.72■■□□□ 1.23
MRPL40-201ENST00000333130 ATP2A2P16615 1042 aaKnown RBP22.71■■□□□ 1.23
MRPL40-201ENST00000333130 WDR5P61964 334 aaKnown RBP22.71■■□□□ 1.23
MRPL40-201ENST00000333130 POU5F1BQ06416 359 aa22.71■■□□□ 1.23
MRPL40-201ENST00000333130 PCBP1Q15365 356 aaKnown RBP eCLIP22.71■■□□□ 1.23
MRPL40-201ENST00000333130 HABP4Q5JVS0 413 aaKnown RBP22.71■■□□□ 1.23
MRPL40-201ENST00000333130 RINT1Q6NUQ1 792 aa22.71■■□□□ 1.23
MRPL40-201ENST00000333130 FAM228AQ86W67 206 aa22.71■■□□□ 1.23
MRPL40-201ENST00000333130 PHOSPHO2Q8TCD6 241 aa22.71■■□□□ 1.23
MRPL40-201ENST00000333130 GBP4Q96PP9 640 aa22.71■■□□□ 1.23
MRPL40-201ENST00000333130 CXXC1Q9P0U4 656 aaPredicted RBP22.71■■□□□ 1.23
MRPL40-201ENST00000333130 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.7■■□□□ 1.22
MRPL40-201ENST00000333130 A0A1B0GVL5 298 aa22.7■■□□□ 1.22
MRPL40-201ENST00000333130 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.7■■□□□ 1.22
MRPL40-201ENST00000333130 DENND3A2RUS2 1198 aa22.7■■□□□ 1.22
MRPL40-201ENST00000333130 LRRIQ4A6NIV6 560 aa22.7■■□□□ 1.22
MRPL40-201ENST00000333130 KRT18P05783 430 aaKnown RBP22.7■■□□□ 1.22
MRPL40-201ENST00000333130 ZSCAN20P17040 1043 aaPredicted RBP22.7■■□□□ 1.22
MRPL40-201ENST00000333130 GUCY2CP25092 1073 aa22.7■■□□□ 1.22
MRPL40-201ENST00000333130 ZBTB8OSQ8IWT0 167 aa22.7■■□□□ 1.22
MRPL40-201ENST00000333130 PDILTQ8N807 584 aa22.7■■□□□ 1.22
MRPL40-201ENST00000333130 C2orf40Q9H1Z8 148 aa22.7■■□□□ 1.22
MRPL40-201ENST00000333130 CUEDC2Q9H467 287 aa22.7■■□□□ 1.22
MRPL40-201ENST00000333130 GOLPH3LQ9H4A5 285 aa22.7■■□□□ 1.22
MRPL40-201ENST00000333130 ERVK-5Q9HDB9 667 aa22.7■■□□□ 1.22
MRPL40-201ENST00000333130 GPRC5CQ9NQ84 441 aa22.7■■□□□ 1.22
MRPL40-201ENST00000333130 KCNG1Q9UIX4 513 aa22.7■■□□□ 1.22
MRPL40-201ENST00000333130 ERLIN2O94905 339 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 GLRA2P23416 452 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 NCBP1Q09161 790 aaKnown RBP22.69■■□□□ 1.22
MRPL40-201ENST00000333130 CAPSQ13938 189 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 DHX8Q14562 1220 aaKnown RBP22.69■■□□□ 1.22
MRPL40-201ENST00000333130 CATSPER4Q7RTX7 472 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 GPBP1Q86WP2 473 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 FSIP1Q8NA03 581 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 IQUBQ8NA54 791 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 ASAP3Q8TDY4 903 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 RUSC1Q9BVN2 902 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 NFKBIZQ9BYH8 718 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 PANK2Q9BZ23 570 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 OSBPL7Q9BZF2 842 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 C17orf75Q9HAS0 396 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 IFT122Q9HBG6 1241 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 GBF1Q92538 1859 aa22.69■■□□□ 1.22
MRPL40-201ENST00000333130 POLR2DO15514 142 aaKnown RBP22.68■■□□□ 1.22
MRPL40-201ENST00000333130 NAMPTP43490 491 aa22.68■■□□□ 1.22
MRPL40-201ENST00000333130 NDUFA8P51970 172 aa22.68■■□□□ 1.22
MRPL40-201ENST00000333130 DMP1Q13316 513 aaPredicted RBP22.68■■□□□ 1.22
MRPL40-201ENST00000333130 MCM6Q14566 821 aa22.68■■□□□ 1.22
MRPL40-201ENST00000333130 C1orf186Q6ZWK4 172 aa22.68■■□□□ 1.22
MRPL40-201ENST00000333130 SV2BQ7L1I2 683 aa22.68■■□□□ 1.22
MRPL40-201ENST00000333130 MYOCDQ8IZQ8 938 aa22.68■■□□□ 1.22
MRPL40-201ENST00000333130 DEPTORQ8TB45 409 aa22.68■■□□□ 1.22
MRPL40-201ENST00000333130 ODF2LQ9ULJ1 636 aa22.68■■□□□ 1.22
MRPL40-201ENST00000333130 PTPRSQ13332 1948 aa22.68■■□□□ 1.22
MRPL40-201ENST00000333130 PHLPP2Q6ZVD8 1323 aa22.67■■□□□ 1.22
MRPL40-201ENST00000333130 GOLGA6L4A6NEF3 574 aa22.67■■□□□ 1.22
MRPL40-201ENST00000333130 INO80B-WBP1J3KQ70 363 aa22.67■■□□□ 1.22
MRPL40-201ENST00000333130 HIP1RO75146 1068 aa22.67■■□□□ 1.22
MRPL40-201ENST00000333130 PTENP60484 403 aa22.67■■□□□ 1.22
MRPL40-201ENST00000333130 SMAD3P84022 425 aaKnown RBP22.67■■□□□ 1.22
MRPL40-201ENST00000333130 DHX58Q96C10 678 aa22.67■■□□□ 1.22
MRPL40-201ENST00000333130 ZBED2Q9BTP6 218 aa22.67■■□□□ 1.22
MRPL40-201ENST00000333130 LRRC27Q9C0I9 530 aa22.67■■□□□ 1.22
MRPL40-201ENST00000333130 TSPYL2Q9H2G4 693 aaPredicted RBP22.67■■□□□ 1.22
MRPL40-201ENST00000333130 MAGEF1Q9HAY2 307 aa22.67■■□□□ 1.22
MRPL40-201ENST00000333130 C1orf112Q9NSG2 853 aa22.67■■□□□ 1.22
MRPL40-201ENST00000333130 DACT1Q9NYF0 836 aa22.67■■□□□ 1.22
MRPL40-201ENST00000333130 TTC3P53804 2025 aa22.67■■□□□ 1.22
MRPL40-201ENST00000333130 GADD45BO75293 160 aaPredicted RBP22.66■■□□□ 1.22
MRPL40-201ENST00000333130 TBCAO75347 108 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms