RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 NENFQ9UMX5 172 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 GRID2IPA4D2P6 1211 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 POLR3GO15318 223 aaPredicted RBP18.95■□□□□ 0.62
DDX28-201ENST00000332395 DSG3P32926 999 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 OAZ1P54368 228 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 MAP9Q49MG5 647 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 MEI1Q5TIA1 1274 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 TMEM174Q8WUU8 243 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 INTS2Q9H0H0 1204 aaKnown RBP18.95■□□□□ 0.62
DDX28-201ENST00000332395 PCIF1Q9H4Z3 704 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 DNAJC12Q9UKB3 198 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 ZNF214Q9UL59 606 aaPredicted RBP18.95■□□□□ 0.62
DDX28-201ENST00000332395 ATP8B3O60423 1300 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 EVI5O60447 810 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 ZMYND10O75800 440 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 NR3C2P08235 984 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 KRT13P13646 458 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 SOX5P35711 763 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 GTF2BQ00403 316 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 PLA2G4FQ68DD2 849 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 HAUS6Q7Z4H7 955 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 C12orf56Q8IXR9 622 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 GPRASP2Q96D09 838 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 ST6GALNAC4Q9H4F1 302 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 GPRC5CQ9NQ84 441 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 ANKEF1Q9NU02 776 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 APEX2Q9UBZ4 518 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 ADAMTS5Q9UNA0 930 aa18.94■□□□□ 0.62
DDX28-201ENST00000332395 CAPN2P17655 700 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 DRAP1Q14919 205 aaPredicted RBP18.93■□□□□ 0.62
DDX28-201ENST00000332395 XKR9Q5GH70 373 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 INTS8Q75QN2 995 aaKnown RBP18.93■□□□□ 0.62
DDX28-201ENST00000332395 NLRX1Q86UT6 975 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 RDM1Q8NG50 284 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 TRPM4Q8TD43 1214 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 CBWD1Q9BRT8 395 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 PDE11AQ9HCR9 933 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 RNF14Q9UBS8 474 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 C19orf81C9J6K1 198 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 H3BQF6 201 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 DDX3XO00571 662 aaKnown RBP eCLIP18.93■□□□□ 0.62
DDX28-201ENST00000332395 EIF3JO75822 258 aaKnown RBP18.93■□□□□ 0.62
DDX28-201ENST00000332395 NPEPPSP55786 919 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 PEX3P56589 373 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 CFAP221Q4G0U5 840 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 ZNF746Q6NUN9 644 aaPredicted RBP18.93■□□□□ 0.62
DDX28-201ENST00000332395 DNAAF5Q86Y56 855 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 MS4A14Q96JA4 679 aa18.93■□□□□ 0.62
DDX28-201ENST00000332395 MOV10L1Q9BXT6 1211 aaKnown RBP18.93■□□□□ 0.62
DDX28-201ENST00000332395 SLC16A4O15374 487 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 MATR3P43243 847 aaKnown RBP eCLIP18.92■□□□□ 0.62
DDX28-201ENST00000332395 DNA2P51530 1060 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 NCKAP1LP55160 1127 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 DLG4P78352 724 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 GPS2Q13227 327 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 TMEM132BQ14DG7 1078 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 FAM102BQ5T8I3 360 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 KLRG1Q96E93 195 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 INPP4AQ96PE3 977 aaPredicted RBP18.92■□□□□ 0.62
DDX28-201ENST00000332395 SGIP1Q9BQI5 828 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 LRRC1Q9BTT6 524 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 GPR88Q9GZN0 384 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 ZCCHC17Q9NP64 241 aaKnown RBP18.92■□□□□ 0.62
DDX28-201ENST00000332395 HSPBP1Q9NZL4 362 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 DAAM1Q9Y4D1 1078 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 PCDHA10Q9Y5I2 948 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 LRRIQ3A6PVS8 624 aaPredicted RBP18.92■□□□□ 0.62
DDX28-201ENST00000332395 MAFGO15525 162 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 IFI16Q16666 785 aaKnown RBP18.92■□□□□ 0.62
DDX28-201ENST00000332395 ANO5Q75V66 913 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 XXYLT1Q8NBI6 393 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 NSUN6Q8TEA1 469 aaKnown RBP18.92■□□□□ 0.62
DDX28-201ENST00000332395 SENP7Q9BQF6 1050 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 GGA3Q9NZ52 723 aa18.92■□□□□ 0.62
DDX28-201ENST00000332395 PACSIN2Q9UNF0 486 aaPredicted RBP18.92■□□□□ 0.62
DDX28-201ENST00000332395 EMSYQ7Z589 1322 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 H2AFZP0C0S5 128 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 MYBL2P10244 700 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 NOP2P46087 812 aaKnown RBP18.91■□□□□ 0.62
DDX28-201ENST00000332395 VAMP7P51809 220 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 CCNI2Q6ZMN8 369 aaPredicted RBP18.91■□□□□ 0.62
DDX28-201ENST00000332395 H2AFVQ71UI9 128 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 SLC17A8Q8NDX2 589 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 OLIG1Q8TAK6 271 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 LMO3Q8TAP4 145 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 LNX1Q8TBB1 728 aaPredicted RBP18.91■□□□□ 0.62
DDX28-201ENST00000332395 IWS1Q96ST2 819 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 TSPYL1Q9H0U9 437 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 RFX1P22670 979 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 SNRPFP62306 86 aaKnown RBP18.91■□□□□ 0.62
DDX28-201ENST00000332395 PHLDB3Q6NSJ2 640 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 CATSPERGQ6ZRH7 1159 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 FMNL3Q8IVF7 1028 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 SLC30A5Q8TAD4 765 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 U2AF1L4Q8WU68 220 aaKnown RBP18.91■□□□□ 0.62
DDX28-201ENST00000332395 HDAC7Q8WUI4 952 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 RUBCNQ92622 972 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 TEX13BQ9BXU2 312 aa18.91■□□□□ 0.62
DDX28-201ENST00000332395 RBM12Q9NTZ6 932 aaKnown RBP18.91■□□□□ 0.62
DDX28-201ENST00000332395 INTUQ9ULD6 942 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms