RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ADAM17P78536 824 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 MTMR1Q13613 665 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 NTRK3Q16288 839 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 TRIM71Q2Q1W2 868 aaKnown RBP7.22□□□□□ -1.25
SMG1-201ENST00000330588 FAM47CQ5HY64 1035 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 GDF6Q6KF10 455 aaPredicted RBP7.22□□□□□ -1.25
SMG1-201ENST00000330588 Q6ZUG5 572 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 SERINC5Q86VE9 423 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 SKAP1Q86WV1 359 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 TPCN2Q8NHX9 752 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 CRYGNQ8WXF5 182 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 BRF1Q92994 677 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 VWCEQ96DN2 955 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 GPR20Q99678 358 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 MXRA8Q9BRK3 442 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 C22orf23Q9BZE7 217 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 SEMA6BQ9H3T3 888 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 HDAC6Q9UBN7 1215 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 PCDHA11Q9Y5I1 949 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 CYP46A1Q9Y6A2 500 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 NRCAMQ92823 1304 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 ABHD14A-ACY1A0A1B0GW23 586 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 SMCO2A6NFE2 343 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 LGR5O75473 907 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 CYP2C9P11712 490 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 ITGB5P18084 799 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 PDIA3P30101 505 aaKnown RBP7.21□□□□□ -1.25
SMG1-201ENST00000330588 CHRNA4P43681 627 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 SETQ01105 290 aaPredicted RBP7.21□□□□□ -1.25
SMG1-201ENST00000330588 APOBRQ0VD83 1088 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 CEP55Q53EZ4 464 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 GALNT17Q6IS24 598 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 CNKSR3Q6P9H4 555 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 CMTR1Q8N1G2 835 aaKnown RBP7.21□□□□□ -1.25
SMG1-201ENST00000330588 ZDHHC1Q8WTX9 485 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 SEPT1Q8WYJ6 367 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 DHX38Q92620 1227 aaKnown RBP7.21□□□□□ -1.25
SMG1-201ENST00000330588 GUCD1Q96NT3 240 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 ANO3Q9BYT9 981 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 C6orf50Q9HD87 102 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 MSRAQ9UJ68 235 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 SLC4A7Q9Y6M7 1214 aa7.21□□□□□ -1.25
SMG1-201ENST00000330588 C17orf102A2RUQ5 167 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 MBLAC1A4D2B0 266 aaPredicted RBP7.2□□□□□ -1.26
SMG1-201ENST00000330588 RRN3P2A6NIE6 340 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 MEIS1O00470 390 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 ZNF286BP0CG31 522 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 SMIM10L2AP0DMW4 78 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 SMIM10L2BP0DMW5 78 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 CKBP12277 381 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 CIITAP33076 1130 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 EPHA4P54764 986 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 CCL23P55773 120 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 AKAP17AQ02040 695 aaKnown RBP7.2□□□□□ -1.26
SMG1-201ENST00000330588 TOB2Q14106 344 aaPredicted RBP7.2□□□□□ -1.26
SMG1-201ENST00000330588 ANKRD1Q15327 319 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 PKN1Q16512 942 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 UBE2SQ16763 222 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 FAM26DQ5JW98 314 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 TAF2Q6P1X5 1199 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 CPLX2Q6PUV4 134 aaKnown RBP7.2□□□□□ -1.26
SMG1-201ENST00000330588 LRRC8DQ7L1W4 858 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 CYFIP1Q7L576 1253 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 DAGLBQ8NCG7 672 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 PIBF1Q8WXW3 757 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 TIFAQ96CG3 184 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 TRIM11Q96F44 468 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 TCEANC2Q96MN5 208 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 ANP32EQ9BTT0 268 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 TTYH1Q9H313 450 aaPredicted RBP7.2□□□□□ -1.26
SMG1-201ENST00000330588 SMARCAD1Q9H4L7 1026 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 ZNF576Q9H609 170 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 KCNH7Q9NS40 1196 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 ERAP1Q9NZ08 941 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 RTEL1Q9NZ71 1219 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 SCHIP1Q9P0W5 487 aaPredicted RBP7.2□□□□□ -1.26
SMG1-201ENST00000330588 SLC9A2Q9UBY0 812 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 SQORQ9Y6N5 450 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 CEP290O15078 2479 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 STK36Q9NRP7 1315 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 IGKV6D-21A0A0A0MT36 114 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 SFI1A8K8P3 1242 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 BACH1O14867 736 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 CDKL5O76039 1030 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 DEXIO95424 95 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 ACRP10323 421 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 ATP2A2P16615 1042 aaKnown RBP7.2□□□□□ -1.26
SMG1-201ENST00000330588 USP11P51784 963 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 ARHGAP4P98171 946 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 TEAD4Q15561 434 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 MOXD1Q6UVY6 613 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 Q7L0L9 218 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 PLPPR4Q7Z2D5 763 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 REXO1Q8N1G1 1221 aaKnown RBP7.2□□□□□ -1.26
SMG1-201ENST00000330588 APBB2Q92870 758 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 ATP6V0A1Q93050 837 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 SCLYQ96I15 445 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 CDX2Q99626 313 aaPredicted RBP7.2□□□□□ -1.26
SMG1-201ENST00000330588 SDF4Q9BRK5 362 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 ALG1Q9BT22 464 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms