RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 TNFAIP1Q13829 316 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 GLYCTKQ8IVS8 523 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 SAMD3Q8N6K7 520 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 LMO3Q8TAP4 145 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 TMEM174Q8WUU8 243 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 ACCSQ96QU6 501 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 KRT12Q99456 494 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 TBC1D22BQ9NU19 505 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 GINM1Q9NU53 330 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 ASTN2O75129 1339 aaPredicted RBP15.84■□□□□ 0.13
TPM3-206ENST00000330188 GOLGA6BA6NDN3 693 aa15.83■□□□□ 0.13
TPM3-206ENST00000330188 CTNND1O60716 968 aaKnown RBP15.83■□□□□ 0.13
TPM3-206ENST00000330188 VCAM1P19320 739 aa15.83■□□□□ 0.13
TPM3-206ENST00000330188 NPEPPSP55786 919 aa15.83■□□□□ 0.13
TPM3-206ENST00000330188 HNRNPH2P55795 449 aaKnown RBP15.83■□□□□ 0.13
TPM3-206ENST00000330188 UGCGQ16739 394 aa15.83■□□□□ 0.13
TPM3-206ENST00000330188 C12orf56Q8IXR9 622 aa15.83■□□□□ 0.13
TPM3-206ENST00000330188 IFT20Q8IY31 132 aa15.83■□□□□ 0.13
TPM3-206ENST00000330188 PCIF1Q9H4Z3 704 aa15.83■□□□□ 0.13
TPM3-206ENST00000330188 RGS17Q9UGC6 210 aaPredicted RBP15.83■□□□□ 0.13
TPM3-206ENST00000330188 STXBP5LQ9Y2K9 1186 aa15.83■□□□□ 0.13
TPM3-206ENST00000330188 NCANO14594 1321 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 TMEM150BA6NC51 233 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 ZSCAN5CA6NGD5 496 aaPredicted RBP15.83■□□□□ 0.12
TPM3-206ENST00000330188 KRT13P13646 458 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 YWHABP31946 246 aaKnown RBP15.83■□□□□ 0.12
TPM3-206ENST00000330188 DLG4P78352 724 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 NNTQ13423 1086 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 MTMR2Q13614 643 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 PTPROQ16827 1216 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 PHLDB3Q6NSJ2 640 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 POTEAQ6S8J7 498 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 TSEN2Q8NCE0 465 aaKnown RBP15.83■□□□□ 0.12
TPM3-206ENST00000330188 ACTRT1Q8TDG2 376 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 LMBR1Q8WVP7 490 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 CBWD1Q9BRT8 395 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 PIM2Q9P1W9 311 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 CALCOCO1Q9P1Z2 691 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 DOCK1Q14185 1865 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 EMSYQ7Z589 1322 aa15.83■□□□□ 0.12
TPM3-206ENST00000330188 ATP9AO75110 1047 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 MYCLP12524 364 aaPredicted RBP15.82■□□□□ 0.12
TPM3-206ENST00000330188 CARSP49589 748 aaKnown RBP15.82■□□□□ 0.12
TPM3-206ENST00000330188 GUCY2DQ02846 1103 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 ARHGAP44Q17R89 818 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.82■□□□□ 0.12
TPM3-206ENST00000330188 INTS8Q75QN2 995 aaKnown RBP15.82■□□□□ 0.12
TPM3-206ENST00000330188 FMNL3Q8IVF7 1028 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 C4orf19Q8IY42 314 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 METTL13Q8N6R0 699 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 AFAP1L1Q8TED9 768 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 SCFD2Q8WU76 684 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 JDP2Q8WYK2 163 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 SH2D3AQ9BRG2 576 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 PDCD2LQ9BRP1 358 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 EPB41L5Q9HCM4 733 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 PXMP2Q9NR77 195 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 SUCLA2Q9P2R7 463 aaPredicted RBP15.82■□□□□ 0.12
TPM3-206ENST00000330188 BACH1O14867 736 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 RAD51CO43502 376 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 CEP104O60308 925 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 TMEM253P0C7T8 217 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 CAPN2P17655 700 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 RFX1P22670 979 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 TNNC1P63316 161 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 GTF2BQ00403 316 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 TAF3Q5VWG9 929 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 PEX26Q7Z412 305 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 SYCE1Q8N0S2 351 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 SLC16A10Q8TF71 515 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 TRERF1Q96PN7 1200 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 RMDN3Q96TC7 470 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 TAOK3Q9H2K8 898 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 ST6GALNAC4Q9H4F1 302 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 PLEKHA4Q9H4M7 779 aa15.82■□□□□ 0.12
TPM3-206ENST00000330188 RPAP3Q9H6T3 665 aaPredicted RBP15.82■□□□□ 0.12
TPM3-206ENST00000330188 WDR81Q562E7 1941 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 COL11A1P12107 1806 aaPredicted RBP15.81■□□□□ 0.12
TPM3-206ENST00000330188 ESYT3A0FGR9 886 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 ZBED4O75132 1171 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 CCNE2O96020 404 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 CCDC172P0C7W6 258 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 ACTN2P35609 894 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 BRCA1P38398 1863 aaKnown RBP15.81■□□□□ 0.12
TPM3-206ENST00000330188 VAMP7P51809 220 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 PPP3CAQ08209 521 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 KIF22Q14807 665 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 C1orf220Q5T0J3 134 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 HAUS6Q7Z4H7 955 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 NT5DC3Q86UY8 548 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 ZSWIM2Q8NEG5 633 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 CASKIN2Q8WXE0 1202 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 TIPINQ9BVW5 301 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 GPRC5CQ9NQ84 441 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 HSPBP1Q9NZL4 362 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 NFU1Q9UMS0 254 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 IGSF9BQ9UPX0 1349 aa15.81■□□□□ 0.12
TPM3-206ENST00000330188 TMCO5BA8MYB1 307 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 FOXN3O00409 490 aaPredicted RBP15.8■□□□□ 0.12
TPM3-206ENST00000330188 JAK3P52333 1124 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms