RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ATP6V0A4Q9HBG4 840 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 PDGFCQ9NRA1 345 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 TISP43B9A030 160 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 TCF7P36402 384 aaPredicted RBP22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 STAT5BP51692 787 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 SMTNP53814 917 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 DMP1Q13316 513 aaPredicted RBP22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 HSDL1Q3SXM5 330 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 FAM186BQ8IYM0 893 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 TMEM161BQ8NDZ6 487 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 PARK7Q99497 189 aaKnown RBP22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 NTPCRQ9BSD7 190 aaKnown RBP22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 MKNK1Q9BUB5 465 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 KIFC3Q9BVG8 833 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 AFPP02771 609 aaKnown RBP22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 PPP2R3AQ06190 1150 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 MEA1Q16626 185 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 DCAF17Q5H9S7 520 aaPredicted RBP22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 ARMCX2Q7L311 632 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 SLC9A9Q8IVB4 645 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 SLC17A8Q8NDX2 589 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 NIFKQ9BYG3 293 aaKnown RBP22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 C17orf75Q9HAS0 396 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 STRNO43815 780 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 BMS1Q14692 1282 aaKnown RBP22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 TCERG1LQ5VWI1 586 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 NEK11Q8NG66 645 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 AFAP1L1Q8TED9 768 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 SPIRE2Q8WWL2 714 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 COPS5Q92905 334 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 SLC35C1Q96A29 364 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 GPR20Q99678 358 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 KMT5AQ9NQR1 393 aa22.18■■□□□ 1.14
RIPPLY3-201ENST00000329553 PLXNB2O15031 1838 aa22.17■■□□□ 1.14
RIPPLY3-201ENST00000329553 NOL4O94818 638 aa22.17■■□□□ 1.14
RIPPLY3-201ENST00000329553 CCDC175P0C221 793 aa22.17■■□□□ 1.14
RIPPLY3-201ENST00000329553 FAM160B1Q5W0V3 765 aa22.17■■□□□ 1.14
RIPPLY3-201ENST00000329553 ABRAQ8N0Z2 381 aa22.17■■□□□ 1.14
RIPPLY3-201ENST00000329553 CEP89Q96ST8 783 aa22.17■■□□□ 1.14
RIPPLY3-201ENST00000329553 FRMD4BQ9Y2L6 1034 aa22.17■■□□□ 1.14
RIPPLY3-201ENST00000329553 MRFAP1Q9Y605 127 aa22.17■■□□□ 1.14
RIPPLY3-201ENST00000329553 IVNS1ABPQ9Y6Y0 642 aa22.17■■□□□ 1.14
RIPPLY3-201ENST00000329553 TXNP10599 105 aaKnown RBP22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 POLGP54098 1239 aaPredicted RBP22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 MYBPC2Q14324 1141 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 DHX37Q8IY37 1157 aaKnown RBP22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 LSM14BQ9BX40 385 aaKnown RBP22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 PCIF1Q9H4Z3 704 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 TBX20Q9UMR3 447 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 FHOD1Q9Y613 1164 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 PLXNA1Q9UIW2 1896 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 EXOC3O60645 756 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 RTP1P59025 263 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 APBA1Q02410 837 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 EMC2Q15006 297 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 GPR142Q7Z601 462 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 BAP1Q92560 729 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 POLR3FQ9H1D9 316 aaPredicted RBP22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 DHX33Q9H6R0 707 aaKnown RBP22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 NRBP2Q9NSY0 501 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 ZNHIT6Q9NWK9 470 aaKnown RBP22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 TRPM7Q96QT4 1865 aa22.16■■□□□ 1.14
RIPPLY3-201ENST00000329553 DENND3A2RUS2 1198 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 ZNF157P51786 506 aaPredicted RBP22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 FAM110CQ1W6H9 321 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 RDH13Q8NBN7 331 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 ACRBPQ8NEB7 543 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 SPATA33Q96N06 139 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 CBWD1Q9BRT8 395 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 EDEM3Q9BZQ6 932 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 PLAGL2Q9UPG8 496 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 EPN1Q9Y6I3 576 aaPredicted RBP22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 ADGRA3Q8IWK6 1321 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 A0A0U1RQJ8 604 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 ZRANB2O95218 330 aaKnown RBP eCLIP22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 HNRNPH3P31942 346 aaKnown RBP22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 TTLL4Q14679 1199 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 TARBP2Q15633 366 aaKnown RBP22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 RRAGAQ7L523 313 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 RASAL3Q86YV0 1011 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 C12orf56Q8IXR9 622 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 TMEM174Q8WUU8 243 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 ATRIPQ8WXE1 791 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 TMEM143Q96AN5 459 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 AZI2Q9H6S1 392 aa22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 ARGLU1Q9NWB6 273 aaPredicted RBP22.15■■□□□ 1.14
RIPPLY3-201ENST00000329553 NOP56O00567 594 aaKnown RBP22.14■■□□□ 1.14
RIPPLY3-201ENST00000329553 TAPT1Q6NXT6 567 aa22.14■■□□□ 1.14
RIPPLY3-201ENST00000329553 SCFD2Q8WU76 684 aa22.14■■□□□ 1.14
RIPPLY3-201ENST00000329553 NLRC4Q9NPP4 1024 aa22.14■■□□□ 1.14
RIPPLY3-201ENST00000329553 ZHX1Q9UKY1 873 aaPredicted RBP22.14■■□□□ 1.14
RIPPLY3-201ENST00000329553 DIS3Q9Y2L1 958 aaKnown RBP22.14■■□□□ 1.14
RIPPLY3-201ENST00000329553 LRRC53A6NM62 1247 aa22.14■■□□□ 1.13
RIPPLY3-201ENST00000329553 LGR5O75473 907 aa22.14■■□□□ 1.13
RIPPLY3-201ENST00000329553 NDUFA10O95299 355 aa22.14■■□□□ 1.13
RIPPLY3-201ENST00000329553 SLC9A1P19634 815 aa22.14■■□□□ 1.13
RIPPLY3-201ENST00000329553 DPY19L2P1Q6NXN4 242 aa22.14■■□□□ 1.13
RIPPLY3-201ENST00000329553 CACNA2D4Q7Z3S7 1137 aa22.14■■□□□ 1.13
RIPPLY3-201ENST00000329553 TRIM50Q86XT4 487 aa22.14■■□□□ 1.13
RIPPLY3-201ENST00000329553 MAP4K3Q8IVH8 894 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms