RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 MCPH1Q8NEM0 835 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 NUCKS1Q9H1E3 243 aaKnown RBP14.26□□□□□ -0.13
LIN28A-202ENST00000326279 ELNP15502 786 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 YARSP54577 528 aaKnown RBP14.26□□□□□ -0.13
LIN28A-202ENST00000326279 EFCAB12Q6NXP0 572 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 KIAA0895Q8NCT3 520 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 GOLGA5Q8TBA6 731 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 BLOC1S4Q9NUP1 217 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 PCDHA13Q9Y5I0 950 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 ROBO3Q96MS0 1386 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 PLEKP08567 350 aaPredicted RBP14.25□□□□□ -0.13
LIN28A-202ENST00000326279 PNMA6AP0CW24 399 aaPredicted RBP14.25□□□□□ -0.13
LIN28A-202ENST00000326279 SLC9A1P19634 815 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 SREBF2Q12772 1141 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 SETD4Q9NVD3 440 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.25□□□□□ -0.13
LIN28A-202ENST00000326279 NRAPQ86VF7 1730 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 GOLGA6L10A0A0M3HER8 536 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 MCM3P25205 808 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 PIK3CAP42336 1068 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 APBA1Q02410 837 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 TFDP1Q14186 410 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 BRI3BPQ8WY22 251 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 MROH8Q9H579 483 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 TLDC2A0PJX2 215 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 GH1P01241 217 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 NLRP11P59045 1033 aaKnown RBP14.25□□□□□ -0.13
LIN28A-202ENST00000326279 FSTL1Q12841 308 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 ZNF746Q6NUN9 644 aaPredicted RBP14.25□□□□□ -0.13
LIN28A-202ENST00000326279 TTI2Q6NXR4 508 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 VSIG10LQ86VR7 867 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 KIFAP3Q92845 792 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 RABEP2Q9H5N1 569 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 HYOU1Q9Y4L1 999 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 NUB1Q9Y5A7 615 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 GCLCP48506 637 aaPredicted RBP14.25□□□□□ -0.13
LIN28A-202ENST00000326279 EMC2Q15006 297 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 PCNX4Q63HM2 1172 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 CCDC60Q8IWA6 550 aaPredicted RBP14.25□□□□□ -0.13
LIN28A-202ENST00000326279 PROCA1Q8NCQ7 364 aaPredicted RBP14.25□□□□□ -0.13
LIN28A-202ENST00000326279 CCDC94Q9BW85 323 aaPredicted RBP14.25□□□□□ -0.13
LIN28A-202ENST00000326279 PRDM5Q9NQX1 630 aaPredicted RBP14.25□□□□□ -0.13
LIN28A-202ENST00000326279 TRIM17Q9Y577 477 aa14.25□□□□□ -0.13
LIN28A-202ENST00000326279 VAV2P52735 878 aa14.24□□□□□ -0.13
LIN28A-202ENST00000326279 MRPS9P82933 396 aaKnown RBP14.24□□□□□ -0.13
LIN28A-202ENST00000326279 ALKBH5Q6P6C2 394 aaKnown RBP14.24□□□□□ -0.13
LIN28A-202ENST00000326279 GINM1Q9NU53 330 aa14.24□□□□□ -0.13
LIN28A-202ENST00000326279 TYW1Q9NV66 732 aaKnown RBP14.24□□□□□ -0.13
LIN28A-202ENST00000326279 VPS18Q9P253 973 aa14.24□□□□□ -0.13
LIN28A-202ENST00000326279 DNAJC12Q9UKB3 198 aa14.24□□□□□ -0.13
LIN28A-202ENST00000326279 PACSIN2Q9UNF0 486 aaPredicted RBP14.24□□□□□ -0.13
LIN28A-202ENST00000326279 SPEF2Q9C093 1822 aa14.24□□□□□ -0.13
LIN28A-202ENST00000326279 TBX3O15119 743 aa14.24□□□□□ -0.13
LIN28A-202ENST00000326279 MESDQ14696 234 aa14.24□□□□□ -0.13
LIN28A-202ENST00000326279 HSDL1Q3SXM5 330 aa14.24□□□□□ -0.13
LIN28A-202ENST00000326279 LBX2Q6XYB7 198 aa14.24□□□□□ -0.13
LIN28A-202ENST00000326279 C1orf112Q9NSG2 853 aa14.24□□□□□ -0.13
LIN28A-202ENST00000326279 ITGB3BPQ13352 177 aaPredicted RBP14.24□□□□□ -0.13
LIN28A-202ENST00000326279 DNAAF5Q86Y56 855 aa14.24□□□□□ -0.13
LIN28A-202ENST00000326279 TUFT1Q9NNX1 390 aa14.24□□□□□ -0.13
LIN28A-202ENST00000326279 COL4A1P02462 1669 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 NCK2O43639 380 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 ZNF18P17022 549 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 UBA1P22314 1058 aaKnown RBP14.23□□□□□ -0.13
LIN28A-202ENST00000326279 ARPP19P56211 112 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 MKRN4PQ13434 485 aaPredicted RBP14.23□□□□□ -0.13
LIN28A-202ENST00000326279 SPRYD7Q5W111 196 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 BTNL9Q6UXG8 535 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 EP400NLQ6ZTU2 488 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 XXYLT1Q8NBI6 393 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 SMC1BQ8NDV3 1235 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 TMEM206Q9H813 350 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 ZNF214Q9UL59 606 aaPredicted RBP14.23□□□□□ -0.13
LIN28A-202ENST00000326279 NEFHP12036 1026 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 MMP14P50281 582 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 SYNJ2BP-COX16A0A087WUM0 186 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 MANSC4A6NHS7 340 aaPredicted RBP14.23□□□□□ -0.13
LIN28A-202ENST00000326279 ZNF233A6NK53 670 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 EFCAB8A8MWE9 144 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 ABL1P00519 1130 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 KLRC1P26715 233 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 GUCY2FP51841 1108 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 CFAP221Q4G0U5 840 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 GJB7Q6PEY0 223 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 SND1Q7KZF4 910 aaKnown RBP eCLIP14.23□□□□□ -0.13
LIN28A-202ENST00000326279 GPR142Q7Z601 462 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 PRPF31Q8WWY3 499 aaKnown RBP14.23□□□□□ -0.13
LIN28A-202ENST00000326279 MTMR9Q96QG7 549 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 POP1Q99575 1024 aaKnown RBP14.23□□□□□ -0.13
LIN28A-202ENST00000326279 COX16Q9P0S2 106 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 RBPJLQ9UBG7 517 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 LTBP3Q9NS15 1303 aa14.23□□□□□ -0.13
LIN28A-202ENST00000326279 UPP2O95045 317 aa14.22□□□□□ -0.13
LIN28A-202ENST00000326279 CYP2C9P11712 490 aa14.22□□□□□ -0.13
LIN28A-202ENST00000326279 FCGRTP55899 365 aa14.22□□□□□ -0.13
LIN28A-202ENST00000326279 UGCGQ16739 394 aa14.22□□□□□ -0.13
LIN28A-202ENST00000326279 CXCL17Q6UXB2 119 aa14.22□□□□□ -0.13
LIN28A-202ENST00000326279 GSTA5Q7RTV2 222 aa14.22□□□□□ -0.13
LIN28A-202ENST00000326279 SRGAP1Q7Z6B7 1085 aa14.22□□□□□ -0.13
LIN28A-202ENST00000326279 C4orf32Q8N8J7 132 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms