RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ZNF408Q9H9D4 720 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 HAO1Q9UJM8 370 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 ANAPC5Q9UJX4 755 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 RASSF10A6NK89 507 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 CCDC188H7C350 402 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 PLA2G4BP0C869 781 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 NQO1P15559 274 aaKnown RBP8.1□□□□□ -1.11
CDHR3-201ENST00000317716 ALDH1B1P30837 517 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 DYNLT1P63172 113 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 RNASELQ05823 741 aaKnown RBP8.1□□□□□ -1.11
CDHR3-201ENST00000317716 ADCY2Q08462 1091 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 C10orf76Q5T2E6 689 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 UNC13DQ70J99 1090 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 ZNF804AQ7Z570 1209 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 FAM186BQ8IYM0 893 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 CEP70Q8NHQ1 597 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 PIP4K2CQ8TBX8 421 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 OSBPL7Q9BZF2 842 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 NT5C3AQ9H0P0 336 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 ISCUQ9H1K1 167 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 SMYD3Q9H7B4 428 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 OSGEPQ9NPF4 335 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 TXLNGQ9NUQ3 528 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 RHBDL2Q9NX52 303 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 SALL4Q9UJQ4 1053 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 POTEFA5A3E0 1075 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 SORBS3O60504 671 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 RHOBTB3O94955 611 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 POTEIP0CG38 1075 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 KITP10721 976 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 SKIP12755 728 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 GALCP54803 685 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 CCDC137Q6PK04 289 aaKnown RBP8.09□□□□□ -1.11
CDHR3-201ENST00000317716 POTEGQ6S5H5 508 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 POTEEQ6S8J3 1075 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 LRP10Q7Z4F1 713 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 TXNRD3Q86VQ6 643 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 SNRNP27Q8WVK2 155 aaKnown RBP8.09□□□□□ -1.11
CDHR3-201ENST00000317716 CCDC124Q96CT7 223 aaKnown RBP8.09□□□□□ -1.11
CDHR3-201ENST00000317716 DUSP9Q99956 384 aaKnown RBP8.09□□□□□ -1.11
CDHR3-201ENST00000317716 SH2D3AQ9BRG2 576 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 SEMA4AQ9H3S1 761 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 SEMA6BQ9H3T3 888 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 UBE2TQ9NPD8 197 aaPredicted RBP8.09□□□□□ -1.11
CDHR3-201ENST00000317716 PNMA3Q9UL41 463 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 MINPP1Q9UNW1 487 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 FAM208AQ9UK61 1670 aaKnown RBP8.09□□□□□ -1.11
CDHR3-201ENST00000317716 EME2A4GXA9 379 aaPredicted RBP8.09□□□□□ -1.11
CDHR3-201ENST00000317716 CFBP00751 764 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 SKOR1P84550 965 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 OVGP1Q12889 678 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 DRP2Q13474 957 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 PPP2R5DQ14738 602 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 BSPRYQ5W0U4 402 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 PHLDB3Q6NSJ2 640 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 ARHGEF18Q6ZSZ5 1173 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 STXBP4Q6ZWJ1 553 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 SDCCAG8Q86SQ7 713 aaPredicted RBP8.09□□□□□ -1.11
CDHR3-201ENST00000317716 CCHCR1Q8TD31 782 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 IQCDQ96DY2 449 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 HOOK2Q96ED9 719 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 DDX27Q96GQ7 796 aaKnown RBP8.09□□□□□ -1.11
CDHR3-201ENST00000317716 MASTLQ96GX5 879 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 FGD4Q96M96 766 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 BHMT2Q9H2M3 363 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 SYNCQ9H7C4 482 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 CNOT8Q9UFF9 292 aaKnown RBP8.09□□□□□ -1.11
CDHR3-201ENST00000317716 PARP2Q9UGN5 583 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 MCM8Q9UJA3 840 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 DNAJC12Q9UKB3 198 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 AGTPBP1Q9UPW5 1226 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 C15orf41Q9Y2V0 281 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 ZNF804BA4D1E1 1349 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 GRIN2DO15399 1336 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 GRID2IPA4D2P6 1211 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 GOLGA8IPA6NC78 632 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 GOLGA8JA6NMD2 632 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 USP17L15C9J2P7 530 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 USP17L13C9JLJ4 530 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 USP17L11C9JVI0 530 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 USP17L18D6R9N7 530 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 USP17L22D6RA61 530 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 USP17L17D6RBQ6 530 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 USP17L19D6RCP7 530 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 USP17L20D6RJB6 530 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 GYG2O15488 501 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 CPP00450 1065 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 HMGB2P26583 209 aaKnown RBP8.09□□□□□ -1.11
CDHR3-201ENST00000317716 GPSM2P81274 684 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 MECOMQ03112 1051 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 LRRC63Q05C16 580 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 DEUP1Q05D60 604 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 USP17L24Q0WX57 530 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 BYSLQ13895 437 aaKnown RBP8.09□□□□□ -1.11
CDHR3-201ENST00000317716 AADACL2Q6P093 401 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 USP17L6PQ6QN14 398 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 SFR1Q86XK3 245 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 IRF2BP1Q8IU81 584 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 RNF217Q8TC41 542 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 CNKSR1Q969H4 720 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms