RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 STXBP4Q6ZWJ1 553 aa27.38■■□□□ 1.97
CDPF1-201ENST00000314567 TIPINQ9BVW5 301 aa27.38■■□□□ 1.97
CDPF1-201ENST00000314567 DKC1O60832 514 aaKnown RBP eCLIP27.38■■□□□ 1.97
CDPF1-201ENST00000314567 SOX10P56693 466 aa27.38■■□□□ 1.97
CDPF1-201ENST00000314567 MYCT1Q8N699 235 aa27.38■■□□□ 1.97
CDPF1-201ENST00000314567 C16orf70Q9BSU1 422 aa27.38■■□□□ 1.97
CDPF1-201ENST00000314567 RNPEPQ9H4A4 650 aa27.38■■□□□ 1.97
CDPF1-201ENST00000314567 USP27XA6NNY8 438 aa27.37■■□□□ 1.97
CDPF1-201ENST00000314567 CALUO43852 315 aaPredicted RBP27.37■■□□□ 1.97
CDPF1-201ENST00000314567 GCNT3O95395 438 aa27.37■■□□□ 1.97
CDPF1-201ENST00000314567 FXR1P51114 621 aaKnown RBP eCLIP27.37■■□□□ 1.97
CDPF1-201ENST00000314567 TERF1P54274 439 aa27.37■■□□□ 1.97
CDPF1-201ENST00000314567 PLCB4Q15147 1175 aa27.37■■□□□ 1.97
CDPF1-201ENST00000314567 OTUD6AQ7L8S5 288 aa27.37■■□□□ 1.97
CDPF1-201ENST00000314567 CPLX3Q8WVH0 158 aa27.37■■□□□ 1.97
CDPF1-201ENST00000314567 SMARCAD1Q9H4L7 1026 aa27.37■■□□□ 1.97
CDPF1-201ENST00000314567 GPRC5CQ9NQ84 441 aa27.37■■□□□ 1.97
CDPF1-201ENST00000314567 CYP26B1Q9NR63 512 aa27.37■■□□□ 1.97
CDPF1-201ENST00000314567 TYW1Q9NV66 732 aaKnown RBP27.37■■□□□ 1.97
CDPF1-201ENST00000314567 DNAH12Q6ZR08 3092 aa27.37■■□□□ 1.97
CDPF1-201ENST00000314567 PGK1P00558 417 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 MYBP10242 640 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 PLPPR4Q7Z2D5 763 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 NDST4Q9H3R1 872 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 KIF2AO00139 706 aaPredicted RBP27.36■■□□□ 1.97
CDPF1-201ENST00000314567 CETN3O15182 167 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 SEPT4O43236 478 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 PPFIA4O75335 1185 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 INHAP05111 366 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 ARHGEF6Q15052 776 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 CCDC40Q4G0X9 1142 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 FIGNQ5HY92 759 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 NYAP1Q6ZVC0 841 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 DAW1Q8N136 415 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 PXYLP1Q8TE99 480 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 SH3TC2Q8TF17 1288 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 ZBTB10Q96DT7 871 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 C16orf45Q96MC5 204 aaPredicted RBP27.36■■□□□ 1.97
CDPF1-201ENST00000314567 AP5M1Q9H0R1 490 aa27.36■■□□□ 1.97
CDPF1-201ENST00000314567 A6NJR5 290 aa27.35■■□□□ 1.97
CDPF1-201ENST00000314567 ZSCAN12O43309 604 aa27.35■■□□□ 1.97
CDPF1-201ENST00000314567 CHMP4BP1P59074 171 aa27.35■■□□□ 1.97
CDPF1-201ENST00000314567 DGKDQ16760 1214 aa27.35■■□□□ 1.97
CDPF1-201ENST00000314567 MAP3K21Q5TCX8 1036 aa27.35■■□□□ 1.97
CDPF1-201ENST00000314567 TRAPPC12Q8WVT3 735 aa27.35■■□□□ 1.97
CDPF1-201ENST00000314567 ABHD10Q9NUJ1 306 aa27.35■■□□□ 1.97
CDPF1-201ENST00000314567 HIP1RO75146 1068 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 PRPF6O94906 941 aaKnown RBP27.34■■□□□ 1.97
CDPF1-201ENST00000314567 MAPK7Q13164 816 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 FAM178BQ8IXR5 827 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 PPP1R13BQ96KQ4 1090 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 TRMT1Q9NXH9 659 aaKnown RBP27.34■■□□□ 1.97
CDPF1-201ENST00000314567 CAPN11Q9UMQ6 739 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 TRPC6Q9Y210 931 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 R3HCC1Q9Y3T6 440 aaKnown RBP27.34■■□□□ 1.97
CDPF1-201ENST00000314567 DUSP11O75319 330 aaKnown RBP27.34■■□□□ 1.97
CDPF1-201ENST00000314567 C6orf222P0C671 652 aaPredicted RBP27.34■■□□□ 1.97
CDPF1-201ENST00000314567 MAPTP10636 758 aaKnown RBP27.34■■□□□ 1.97
CDPF1-201ENST00000314567 HOXD8P13378 290 aaPredicted RBP27.34■■□□□ 1.97
CDPF1-201ENST00000314567 TNNT1P13805 278 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 GRK4P32298 578 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 HOXD13P35453 343 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 ADAM9Q13443 819 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 SYCP1Q15431 976 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 PTPN14Q15678 1187 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 ATP8B4Q8TF62 1192 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 PRIMPOLQ96LW4 560 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 CEP89Q96ST8 783 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 ERAP1Q9NZ08 941 aa27.34■■□□□ 1.97
CDPF1-201ENST00000314567 ZBTB42B2RXF5 422 aa27.33■■□□□ 1.97
CDPF1-201ENST00000314567 MYCNP04198 464 aaPredicted RBP27.33■■□□□ 1.97
CDPF1-201ENST00000314567 TUBB4AP04350 444 aa27.33■■□□□ 1.97
CDPF1-201ENST00000314567 RPL13P26373 211 aaKnown RBP27.33■■□□□ 1.97
CDPF1-201ENST00000314567 ALCAMQ13740 583 aa27.33■■□□□ 1.97
CDPF1-201ENST00000314567 NFIL3Q16649 462 aa27.33■■□□□ 1.97
CDPF1-201ENST00000314567 FIZ1Q96SL8 496 aa27.33■■□□□ 1.97
CDPF1-201ENST00000314567 NIFKQ9BYG3 293 aaKnown RBP27.33■■□□□ 1.97
CDPF1-201ENST00000314567 TTYH3Q9C0H2 523 aa27.33■■□□□ 1.97
CDPF1-201ENST00000314567 NRBP2Q9NSY0 501 aa27.33■■□□□ 1.97
CDPF1-201ENST00000314567 H3BRB1 525 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 MYCP01106 439 aaPredicted RBP27.32■■□□□ 1.96
CDPF1-201ENST00000314567 NR2F2P24468 414 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 KRT9P35527 623 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 FSCN1Q16658 493 aaKnown RBP27.32■■□□□ 1.96
CDPF1-201ENST00000314567 ODR4Q5SWX8 454 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 ZNF720Q7Z2F6 126 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 TMTC1Q8IUR5 882 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 SLAIN1Q8ND83 568 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 TUT1Q9H6E5 874 aaKnown RBP27.32■■□□□ 1.96
CDPF1-201ENST00000314567 XPNPEP1Q9NQW7 623 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 LARSQ9P2J5 1176 aaKnown RBP27.32■■□□□ 1.96
CDPF1-201ENST00000314567 LUC7L2Q9Y383 392 aaKnown RBP27.32■■□□□ 1.96
CDPF1-201ENST00000314567 A0A1W2PQJ5 194 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 GOLGA6L9A6NEM1 432 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 MYL3P08590 195 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 RARBP10826 455 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 TARBP2Q15633 366 aaKnown RBP27.32■■□□□ 1.96
CDPF1-201ENST00000314567 TRIM59Q8IWR1 403 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 BBXQ8WY36 941 aaPredicted RBP27.32■■□□□ 1.96
CDPF1-201ENST00000314567 Q9Y3F1 56 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms