RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 SRGAP1Q7Z6B7 1085 aa14.18□□□□□ -0.14
CKS2-201ENST00000314355 RBM23Q86U06 439 aaKnown RBP14.18□□□□□ -0.14
CKS2-201ENST00000314355 COLGALT1Q8NBJ5 622 aa14.18□□□□□ -0.14
CKS2-201ENST00000314355 NSUN7Q8NE18 718 aaKnown RBP14.18□□□□□ -0.14
CKS2-201ENST00000314355 CDCA3Q99618 268 aaPredicted RBP14.18□□□□□ -0.14
CKS2-201ENST00000314355 LXNQ9BS40 222 aa14.18□□□□□ -0.14
CKS2-201ENST00000314355 PIN4Q9Y237 131 aaKnown RBP14.18□□□□□ -0.14
CKS2-201ENST00000314355 COL4A3BPQ9Y5P4 624 aa14.18□□□□□ -0.14
CKS2-201ENST00000314355 PRUNE2Q8WUY3 3088 aa14.18□□□□□ -0.14
CKS2-201ENST00000314355 NLRC5Q86WI3 1866 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 BTBD18B2RXH4 712 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 NEMFO60524 1076 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 SRGAP2CP0DJJ0 459 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 FDPSP14324 419 aaKnown RBP14.17□□□□□ -0.14
CKS2-201ENST00000314355 ATP2B1P20020 1258 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 FGFR4P22455 802 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 CA8P35219 290 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 NRIP1P48552 1158 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 FOSBP53539 338 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 NPEPPSP55786 919 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 HMGN5P82970 282 aaKnown RBP14.17□□□□□ -0.14
CKS2-201ENST00000314355 PLCB3Q01970 1234 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 ADAM15Q13444 863 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 TFDP1Q14186 410 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 MXD4Q14582 209 aaPredicted RBP14.17□□□□□ -0.14
CKS2-201ENST00000314355 PLA2G4FQ68DD2 849 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 KCNT2Q6UVM3 1135 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 TMC7Q7Z402 723 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 MRPS27Q92552 414 aaKnown RBP14.17□□□□□ -0.14
CKS2-201ENST00000314355 HAS1Q92839 578 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 DYDC2Q96IM9 177 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 C8orf76Q96K31 380 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 CASD1Q96PB1 797 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 MTRQ99707 1265 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 LLPHQ9BRT6 129 aaKnown RBP14.17□□□□□ -0.14
CKS2-201ENST00000314355 TTC12Q9H892 705 aaPredicted RBP14.17□□□□□ -0.14
CKS2-201ENST00000314355 UPF2Q9HAU5 1272 aaKnown RBP14.17□□□□□ -0.14
CKS2-201ENST00000314355 NGRNQ9NPE2 291 aaKnown RBP14.17□□□□□ -0.14
CKS2-201ENST00000314355 ENTPD7Q9NQZ7 604 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 SPG21Q9NZD8 308 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 CD207Q9UJ71 328 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 VAV3Q9UKW4 847 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 LZTS1Q9Y250 596 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 EYSQ5T1H1 3165 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 LOXHD1Q8IVV2 1947 aa14.17□□□□□ -0.14
CKS2-201ENST00000314355 TTC28Q96AY4 2481 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 TMEM150BA6NC51 233 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 CSDE1O75534 798 aaKnown RBP14.16□□□□□ -0.14
CKS2-201ENST00000314355 ERLIN2O94905 339 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 STBD1O95210 358 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 COL9A1P20849 921 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 CYP4A11Q02928 519 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 RNASELQ05823 741 aaKnown RBP14.16□□□□□ -0.14
CKS2-201ENST00000314355 CTTNQ14247 550 aaKnown RBP14.16□□□□□ -0.14
CKS2-201ENST00000314355 PCBP1Q15365 356 aaKnown RBP eCLIP14.16□□□□□ -0.14
CKS2-201ENST00000314355 TMEM31Q5JXX7 168 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 GLB1LQ6UWU2 654 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 EFHBQ8N7U6 833 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 PRPF31Q8WWY3 499 aaKnown RBP14.16□□□□□ -0.14
CKS2-201ENST00000314355 TMEM169Q96HH4 297 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 FAM193BQ96PV7 902 aaPredicted RBP14.16□□□□□ -0.14
CKS2-201ENST00000314355 EIF2AK1Q9BQI3 630 aaKnown RBP14.16□□□□□ -0.14
CKS2-201ENST00000314355 CWH43Q9H720 699 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 SH2B1Q9NRF2 756 aaPredicted RBP14.16□□□□□ -0.14
CKS2-201ENST00000314355 KANSL3Q9P2N6 904 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 KIF3AQ9Y496 699 aa14.16□□□□□ -0.14
CKS2-201ENST00000314355 CHD7Q9P2D1 2997 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 PHKA2P46019 1235 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 DRP2Q13474 957 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 SMAD4Q13485 552 aaKnown RBP14.15□□□□□ -0.14
CKS2-201ENST00000314355 COL19A1Q14993 1142 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 CLUL1Q15846 466 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 CTC1Q2NKJ3 1217 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 CCDC83Q8IWF9 413 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 CNNM3Q8NE01 707 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 ERMNQ8TAM6 284 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 URGCPQ8TCY9 931 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 HELQQ8TDG4 1101 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 TMEM143Q96AN5 459 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 TCF25Q9BQ70 676 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 TRAIPQ9BWF2 469 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 EPHX3Q9H6B9 360 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 DHX33Q9H6R0 707 aaKnown RBP14.15□□□□□ -0.14
CKS2-201ENST00000314355 ANKEF1Q9NU02 776 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 FAM105AQ9NUU6 356 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 RGL1Q9NZL6 768 aa14.15□□□□□ -0.14
CKS2-201ENST00000314355 NOL7Q9UMY1 257 aaKnown RBP14.15□□□□□ -0.14
CKS2-201ENST00000314355 MBTPS2O43462 519 aa14.14□□□□□ -0.15
CKS2-201ENST00000314355 JAK2O60674 1132 aa14.14□□□□□ -0.15
CKS2-201ENST00000314355 DTNBO60941 627 aa14.14□□□□□ -0.15
CKS2-201ENST00000314355 DGAT1O75907 488 aa14.14□□□□□ -0.15
CKS2-201ENST00000314355 SLITRK3O94933 977 aa14.14□□□□□ -0.15
CKS2-201ENST00000314355 LARGE1O95461 756 aa14.14□□□□□ -0.15
CKS2-201ENST00000314355 XRCC6P12956 609 aaKnown RBP eCLIP14.14□□□□□ -0.151e-9■■□□□ 11.9
CKS2-201ENST00000314355 DNAJB1P25685 340 aa14.14□□□□□ -0.15
CKS2-201ENST00000314355 IRS1P35568 1242 aa14.14□□□□□ -0.15
CKS2-201ENST00000314355 RBM25P49756 843 aaKnown RBP14.14□□□□□ -0.15
CKS2-201ENST00000314355 LAMTOR4Q0VGL1 99 aa14.14□□□□□ -0.15
CKS2-201ENST00000314355 CAMK1Q14012 370 aa14.14□□□□□ -0.15
CKS2-201ENST00000314355 EMC2Q15006 297 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms