RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 DUPD1Q68J44 220 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 ANKRD27Q96NW4 1050 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 TBC1D7Q9P0N9 293 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 KLHL14Q9P2G3 628 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 WDR35Q9P2L0 1181 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 TMEM120BA0PK00 339 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 FOXO6A8MYZ6 492 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 COBLL1Q53SF7 1204 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 EXOC3L1Q86VI1 746 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 PIGOQ8TEQ8 1089 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 GORASP1Q9BQQ3 440 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 MMTAG2Q9BU76 263 aaKnown RBP19.46■□□□□ 0.71
SPSB4-201ENST00000310546 PPP1R12CQ9BZL4 782 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 TMX4Q9H1E5 349 aaPredicted RBP19.46■□□□□ 0.71
SPSB4-201ENST00000310546 RPTORQ8N122 1335 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 GPR75-ASB3A0A0A6YYF3 556 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 LAD1O00515 517 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 UNC5CO95185 931 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 MMP10P09238 476 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 TXKP42681 527 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 GPSM2P81274 684 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 USP4Q13107 963 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 ZNF211Q13398 564 aaPredicted RBP19.46■□□□□ 0.71
SPSB4-201ENST00000310546 SPDYCQ5MJ68 293 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 NT5DC3Q86UY8 548 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 CCDC25Q86WR0 208 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 CDK5RAP3Q96JB5 506 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 ERVK-5Q9HDB9 667 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 ASB3Q9Y575 518 aa19.46■□□□□ 0.71
SPSB4-201ENST00000310546 AUHQ13825 339 aaKnown RBP19.45■□□□□ 0.7
SPSB4-201ENST00000310546 ARHGAP27Q6ZUM4 889 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 ARHGAP22Q7Z5H3 698 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 DEFB132Q7Z7B7 95 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 NELFCDQ8IXH7 590 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 STK32AQ8WU08 396 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 STMN4Q9H169 189 aaPredicted RBP19.45■□□□□ 0.7
SPSB4-201ENST00000310546 SUCLA2Q9P2R7 463 aaPredicted RBP19.45■□□□□ 0.7
SPSB4-201ENST00000310546 BTNL10A8MVZ5 291 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 USP17L12C9JPN9 530 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 USP17L21D6R901 530 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 UFL1O94874 794 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 GJB6O95452 261 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 TPBGLP0DKB5 382 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 GM2AP17900 193 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 SP100P23497 879 aaPredicted RBP19.45■□□□□ 0.7
SPSB4-201ENST00000310546 PEX5P50542 639 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 SESN3P58005 492 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 LONRF1Q17RB8 773 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 KIAA1755Q5JYT7 1200 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 PEX11AO75192 247 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 GH1P01241 217 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 PTDSS1P48651 473 aaKnown RBP19.45■□□□□ 0.7
SPSB4-201ENST00000310546 PTENP60484 403 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 ADCY1Q08828 1119 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 MUM1Q2TAK8 710 aa19.45■□□□□ 0.7
SPSB4-201ENST00000310546 LARP4BQ92615 738 aaKnown RBP19.45■□□□□ 0.7
SPSB4-201ENST00000310546 RGPD3A6NKT7 1758 aaPredicted RBP19.44■□□□□ 0.7
SPSB4-201ENST00000310546 RGPD4Q7Z3J3 1758 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 O00370 1275 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 MGAT5Q09328 741 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 CUL3Q13618 768 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 IRF2BP2Q7Z5L9 587 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 VSIG1Q86XK7 387 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 JAMLQ86YT9 394 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 MYOCDQ8IZQ8 938 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 DNAJC9Q8WXX5 260 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 BLOC1S4Q9NUP1 217 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 AMFRQ9UKV5 643 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 M0R2N6 131 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 POLRMTO00411 1230 aaKnown RBP19.44■□□□□ 0.7
SPSB4-201ENST00000310546 CCNB1P14635 433 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 MECOMQ03112 1051 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 GRAPQ13588 217 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 TSNAXIP1Q2TAA8 658 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 SLC27A3Q5K4L6 730 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 C10orf76Q5T2E6 689 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 ZDHHC24Q6UX98 284 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 GRAPLQ8TC17 118 aaPredicted RBP19.44■□□□□ 0.7
SPSB4-201ENST00000310546 UCMAQ8WVF2 138 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 DDX12PQ92771 950 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 ARHGEF2Q92974 986 aaKnown RBP19.44■□□□□ 0.7
SPSB4-201ENST00000310546 OSGEPQ9NPF4 335 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 CYP39A1Q9NYL5 469 aa19.44■□□□□ 0.7
SPSB4-201ENST00000310546 TNRC6CQ9HCJ0 1690 aaKnown RBP19.43■□□□□ 0.7
SPSB4-201ENST00000310546 WFS1O76024 890 aa19.43■□□□□ 0.7
SPSB4-201ENST00000310546 TARSP26639 723 aaKnown RBP19.43■□□□□ 0.7
SPSB4-201ENST00000310546 LBRQ14739 615 aaKnown RBP19.43■□□□□ 0.7
SPSB4-201ENST00000310546 ZFAND2BQ8WV99 257 aa19.43■□□□□ 0.7
SPSB4-201ENST00000310546 LMCD1Q9NZU5 365 aa19.43■□□□□ 0.7
SPSB4-201ENST00000310546 PVALEFA0A1B0GWK0 134 aa19.43■□□□□ 0.7
SPSB4-201ENST00000310546 SUPT20HQ8NEM7 779 aa19.43■□□□□ 0.7
SPSB4-201ENST00000310546 C18orf8Q96DM3 657 aa19.43■□□□□ 0.7
SPSB4-201ENST00000310546 TGS1Q96RS0 853 aaKnown RBP19.43■□□□□ 0.7
SPSB4-201ENST00000310546 VCXQ9H320 206 aa19.43■□□□□ 0.7
SPSB4-201ENST00000310546 TSPY2A6NKD2 308 aa19.42■□□□□ 0.7
SPSB4-201ENST00000310546 KIAA0391O15091 583 aaKnown RBP19.42■□□□□ 0.7
SPSB4-201ENST00000310546 H2AFZP0C0S5 128 aa19.42■□□□□ 0.7
SPSB4-201ENST00000310546 SLC9A1P19634 815 aa19.42■□□□□ 0.7
SPSB4-201ENST00000310546 H2AFVQ71UI9 128 aa19.42■□□□□ 0.7
SPSB4-201ENST00000310546 ECHDC2Q86YB7 292 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms