RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 LCA5LO95447 670 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 SERPING1P05155 500 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 UCHL3P15374 230 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 KIF11P52732 1056 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 CYP27A1Q02318 531 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 SLC9C1Q4G0N8 1177 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 GPIHBP1Q8IV16 184 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 RDH13Q8NBN7 331 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 JAKMIP2Q96AA8 810 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 CBWD1Q9BRT8 395 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 AIPL1Q9NZN9 384 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 TRIM10Q9UDY6 481 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 GUCA1BQ9UMX6 200 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 AKR1B10O60218 316 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 CETPP11597 493 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 FMO5P49326 533 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 ASTE1Q2TB18 679 aaPredicted RBP23.23■■□□□ 1.31
ATG4D-201ENST00000309469 CCDC122Q5T0U0 273 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 SLC35F6Q8N357 371 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 MS4A4AQ96JQ5 239 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 KIFC3Q9BVG8 833 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 GCNT4Q9P109 453 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 TFR2Q9UP52 801 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 DENND3A2RUS2 1198 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 GGPS1O95749 300 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 FKBP1BP68106 108 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 NCBP1Q09161 790 aaKnown RBP23.22■■□□□ 1.31
ATG4D-201ENST00000309469 BFSP1Q12934 665 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 RAPGEF1Q13905 1077 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 LY6KQ17RY6 165 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 KCNV1Q6PIU1 500 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 METTL7BQ6UX53 244 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 MAP4K3Q8IVH8 894 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 XXYLT1Q8NBI6 393 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 PCYT2Q99447 389 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 SIX2Q9NPC8 291 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 HSPBP1Q9NZL4 362 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 DDX41Q9UJV9 622 aaKnown RBP23.22■■□□□ 1.31
ATG4D-201ENST00000309469 FBXL5Q9UKA1 691 aa23.22■■□□□ 1.31
ATG4D-201ENST00000309469 RCCD1A6NED2 376 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 PDHXO00330 501 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 KRT86O43790 486 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 KRT13P13646 458 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 GTF2A2P52657 109 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 VAV2P52735 878 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 ILDR2Q71H61 639 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 MTERF4Q7Z6M4 381 aaKnown RBP23.21■■□□□ 1.31
ATG4D-201ENST00000309469 SEPT1Q8WYJ6 367 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 NIFKQ9BYG3 293 aaKnown RBP23.21■■□□□ 1.31
ATG4D-201ENST00000309469 PORCNQ9H237 461 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 MLXIPQ9HAP2 919 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 SLC45A1Q9Y2W3 748 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 TRIM49P0CI25 452 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 TRIM49CP0CI26 452 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 POLGP54098 1239 aaPredicted RBP23.21■■□□□ 1.31
ATG4D-201ENST00000309469 INTS8Q75QN2 995 aaKnown RBP23.21■■□□□ 1.31
ATG4D-201ENST00000309469 GPRC5AQ8NFJ5 357 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 ANKRD7Q92527 254 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 IFT74Q96LB3 600 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 LACRTQ9GZZ8 138 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 POLR3FQ9H1D9 316 aaPredicted RBP23.21■■□□□ 1.31
ATG4D-201ENST00000309469 EFCC1Q9HA90 598 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 PCDHA13Q9Y5I0 950 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 FHOD1Q9Y613 1164 aa23.21■■□□□ 1.31
ATG4D-201ENST00000309469 CCL15-CCL14A0A0B4J2E2 113 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 MAPK13O15264 365 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 ARIH2O95376 493 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 EMC2Q15006 297 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 ASIC2Q16515 512 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 CCL15Q16663 113 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 TDRD12Q587J7 1177 aaKnown RBP23.2■■□□□ 1.3
ATG4D-201ENST00000309469 FAM160B1Q5W0V3 765 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 MORC4Q8TE76 937 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 MAP7D2Q96T17 732 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 GBA2Q9HCG7 927 aaPredicted RBP23.2■■□□□ 1.3
ATG4D-201ENST00000309469 KCNG1Q9UIX4 513 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 MYO6Q9UM54 1294 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 MRFAP1Q9Y605 127 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 LOC102724159A0A0B4J2E5 919 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 CTAGE9A4FU28 777 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 BTBD19C9JJ37 291 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 ANKRD63C9JTQ0 380 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 STAT5BP51692 787 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 KIF5AQ12840 1032 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 NAA30Q147X3 362 aaPredicted RBP23.2■■□□□ 1.3
ATG4D-201ENST00000309469 PWP2Q15269 919 aaKnown RBP23.2■■□□□ 1.3
ATG4D-201ENST00000309469 CBWD6Q4V339 395 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 CBWD3Q5JTY5 395 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 CBWD5Q5RIA9 395 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 AFAP1L1Q8TED9 768 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 SPAG5Q96R06 1193 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 IFIH1Q9BYX4 1025 aaKnown RBP23.2■■□□□ 1.3
ATG4D-201ENST00000309469 DHX33Q9H6R0 707 aaKnown RBP23.2■■□□□ 1.3
ATG4D-201ENST00000309469 NRBP2Q9NSY0 501 aa23.2■■□□□ 1.3
ATG4D-201ENST00000309469 WDR81Q562E7 1941 aa23.19■■□□□ 1.3
ATG4D-201ENST00000309469 CNGA1P29973 690 aa23.19■■□□□ 1.3
ATG4D-201ENST00000309469 TCF7P36402 384 aaPredicted RBP23.19■■□□□ 1.3
ATG4D-201ENST00000309469 VAMP7P51809 220 aa23.19■■□□□ 1.3
ATG4D-201ENST00000309469 CCNA1P78396 465 aa23.19■■□□□ 1.3
ATG4D-201ENST00000309469 MKRN3Q13064 507 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms