RNA–Protein interactions for RNA: ENST00000307180.4

TSNARE1-201, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TSNARE1, Length 1,907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-201ENST00000307180 CST5P28325 142 aaPredicted RBP17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 KLK7P49862 253 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 ACLYP53396 1101 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 CHMP4BP1P59074 171 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 VWA3BQ502W6 1294 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 ARHGAP29Q52LW3 1261 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 BRDTQ58F21 947 aaPredicted RBP17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 ZNF569Q5MCW4 686 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 WDR59Q6PJI9 974 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 CCDC65Q8IXS2 484 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 GLIS3Q8NEA6 775 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 UBXN4Q92575 508 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 FAM20AQ96MK3 541 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 TSG101Q99816 390 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 AGPAT5Q9NUQ2 364 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 EFCAB8A8MWE9 144 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 ZEB2O60315 1214 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 TADA3O75528 432 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 ATN1P54259 1190 aaPredicted RBP17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 ZBED6P86452 979 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 SPIRE1Q08AE8 756 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 FAM26FQ5R3K3 315 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 NECAB2Q7Z6G3 386 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 GPBP1Q86WP2 473 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 PPTC7Q8NI37 304 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 ERMNQ8TAM6 284 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 PPP1R13LQ8WUF5 828 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 EMID1Q96A84 441 aaPredicted RBP17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 C11orf49Q9H6J7 331 aa17.41■□□□□ 0.38
TSNARE1-201ENST00000307180 A0A1W2PQ45 241 aaPredicted RBP17.4■□□□□ 0.38
TSNARE1-201ENST00000307180 A0A1W2PQY0 241 aa17.4■□□□□ 0.38
TSNARE1-201ENST00000307180 ARHGAP25P42331 645 aa17.4■□□□□ 0.38
TSNARE1-201ENST00000307180 NKX3-2P78367 333 aa17.4■□□□□ 0.38
TSNARE1-201ENST00000307180 MEA1Q16626 185 aa17.4■□□□□ 0.38
TSNARE1-201ENST00000307180 FIGNQ5HY92 759 aa17.4■□□□□ 0.38
TSNARE1-201ENST00000307180 FBXO38Q6PIJ6 1188 aa17.4■□□□□ 0.38
TSNARE1-201ENST00000307180 TSEN34Q9BSV6 310 aaKnown RBP17.4■□□□□ 0.38
TSNARE1-201ENST00000307180 NDST4Q9H3R1 872 aa17.4■□□□□ 0.38
TSNARE1-201ENST00000307180 JPH1Q9HDC5 661 aaPredicted RBP17.4■□□□□ 0.38
TSNARE1-201ENST00000307180 ZNHIT6Q9NWK9 470 aaKnown RBP17.4■□□□□ 0.38
TSNARE1-201ENST00000307180 SLC9A2Q9UBY0 812 aa17.4■□□□□ 0.38
TSNARE1-201ENST00000307180 NPHP3-ACAD11A0A0J9YXS1 232 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 DHX15O43143 795 aaKnown RBP17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 ABL1P00519 1130 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 CYP11B2P19099 503 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 MAN2A1Q16706 1144 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 DGKDQ16760 1214 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 HAUS3Q68CZ6 603 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 NCAPH2Q6IBW4 605 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 CATSPER3Q86XQ3 398 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 GPR20Q99678 358 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 PHF24Q9UPV7 400 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 REXO2Q9Y3B8 237 aaKnown RBP17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 STK24Q9Y6E0 443 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 NFASCO94856 1347 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 A0A1W2PQJ5 194 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 MOXD2PA6NHM9 499 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 ZNF286BP0CG31 522 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 COL6A1P12109 1028 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 CAPN2P17655 700 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 RPA1P27694 616 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 PSMC6P62333 389 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 PPP2R3AQ06190 1150 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 ARSHQ5FYA8 562 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 HERC4Q5GLZ8 1057 aaPredicted RBP17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 LRCH2Q5VUJ6 765 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 LRRC55Q6ZSA7 311 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 UBE2Q1Q7Z7E8 422 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 IQCDQ96DY2 449 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 TBC1D7Q9P0N9 293 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 PCDHA2Q9Y5H9 948 aa17.39■□□□□ 0.37
TSNARE1-201ENST00000307180 CHMP2AO43633 222 aa17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 GAS7O60861 476 aa17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 SPATA31C1P0DKV0 1188 aa17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 H2AFXP16104 143 aaPredicted RBP17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 SLC12A3P55017 1021 aa17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 PURAQ00577 322 aaKnown RBP17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 FKBP3Q00688 224 aaKnown RBP17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 ZCWPW2Q504Y3 356 aa17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 POTEGQ6S5H5 508 aa17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 GLT1D1Q96MS3 346 aa17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 STARD7Q9NQZ5 370 aa17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 TBC1D22BQ9NU19 505 aa17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 MYO1AQ9UBC5 1043 aa17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 DNM3Q9UQ16 869 aa17.38■□□□□ 0.37
TSNARE1-201ENST00000307180 GSTTP1A0A1W2PQM5 241 aa17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 CCNE2O96020 404 aa17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 KRT18P05783 430 aaKnown RBP17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 TCF7P36402 384 aaPredicted RBP17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 ACTR2P61160 394 aa17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 TUBB2AQ13885 445 aa17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 SLC35F6Q8N357 371 aa17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 SEPT1Q8WYJ6 367 aa17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 SLC5A5Q92911 643 aa17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 TUBB2BQ9BVA1 445 aa17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 SIK3Q9Y2K2 1263 aa17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 CTAGE9A4FU28 777 aa17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 SPDYE4A6NLX3 237 aa17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 PPFIA4O75335 1185 aa17.37■□□□□ 0.37
TSNARE1-201ENST00000307180 TRIM50Q86XT4 487 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms