RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 KSR1Q8IVT5 923 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ZBTB8OSQ8IWT0 167 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 SYT2Q8N9I0 419 aaPredicted RBP12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PHOSPHO2Q8TCD6 241 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 LARP4BQ92615 738 aaKnown RBP12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 KIFAP3Q92845 792 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 DRC1Q96MC2 740 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ZBED2Q9BTP6 218 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 OSBPL7Q9BZF2 842 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 SCAND2PQ9GZW5 306 aaPredicted RBP12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 GPRC5CQ9NQ84 441 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 FAM13BQ9NYF5 915 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 KCND2Q9NZV8 630 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 MSRAQ9UJ68 235 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ST3GAL5Q9UNP4 418 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 TRIOBPQ9H2D6 2365 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 RALGAPA2Q2PPJ7 1873 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 KRT18P05783 430 aaKnown RBP12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ZSCAN20P17040 1043 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 GLRA2P23416 452 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ARL2P36404 184 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 SLC12A3P55017 1021 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 DEFB103AP81534 67 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 NCBP1Q09161 790 aaKnown RBP12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 DMP1Q13316 513 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 CAPSQ13938 189 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 DHX8Q14562 1220 aaKnown RBP12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 RAB30Q15771 203 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 TCTN1Q2MV58 587 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 RINT1Q6NUQ1 792 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 DEPTORQ8TB45 409 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ASAP3Q8TDY4 903 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 RAD54LQ92698 747 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 C2orf40Q9H1Z8 148 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 C1orf112Q9NSG2 853 aa12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 FNDC1Q4ZHG4 1894 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 KIAA1671Q9BY89 1806 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 INO80B-WBP1J3KQ70 363 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 TLL1O43897 1013 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 HIP1RO75146 1068 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 IBSPP21815 317 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 FGFR4P22455 802 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 GUCY2CP25092 1073 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 DDIT3P35638 169 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 NAMPTP43490 491 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 POU5F1BQ06416 359 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 MCM6Q14566 821 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PCBP1Q15365 356 aaKnown RBP eCLIP12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 USP49Q70CQ1 688 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 GPBP1Q86WP2 473 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 HERC6Q8IVU3 1022 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 LEO1Q8WVC0 666 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PYM1Q9BRP8 204 aaKnown RBP12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 RUSC1Q9BVN2 902 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 IFT122Q9HBG6 1241 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 DACT1Q9NYF0 836 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 RCOR1Q9UKL0 485 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 LRFN2Q9ULH4 789 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PCDHA7Q9UN72 937 aa12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PIN4Q9Y237 131 aaKnown RBP12.17□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PHLPP2Q6ZVD8 1323 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 TBCAO75347 108 aaKnown RBP12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 CSDE1O75534 798 aaKnown RBP12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 UPP2O95045 317 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 STAG3L1P0CL83 205 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 DNAJB2P25686 324 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PTENP60484 403 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 RAD51AP2Q09MP3 1159 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 TMEM132AQ24JP5 1023 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 TWF2Q6IBS0 349 aaKnown RBP12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 FAM117BQ6P1L5 589 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 C1orf186Q6ZWK4 172 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 SV2BQ7L1I2 683 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PDILTQ8N807 584 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 YME1L1Q96TA2 773 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ADAM2Q99965 735 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 NFKBIZQ9BYH8 718 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 CUEDC2Q9H467 287 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 C17orf75Q9HAS0 396 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 BLOC1S4Q9NUP1 217 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 CHMP5Q9NZZ3 219 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 KCNG1Q9UIX4 513 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ODF2LQ9ULJ1 636 aa12.16□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 TDRD15B5MCY1 1934 aaKnown RBP12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 GOLGA6L4A6NEF3 574 aa12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 CCDC169A6NNP5 214 aa12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 GRXCR1A8MXD5 290 aa12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 SOX1O00570 391 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ENPP3O14638 875 aa12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 FAM13AO94988 1023 aa12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 GJB5O95377 273 aa12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 AXLP30530 894 aa12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 SARSP49591 514 aaKnown RBP12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 RABGGTBP53611 331 aa12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 SMTNP53814 917 aa12.15□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PEX3P56589 373 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms