RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 STK24Q9Y6E0 443 aa17.54■□□□□ 0.4
LONRF3-201ENST00000304778 ZNF233A6NK53 670 aa17.54■□□□□ 0.4
LONRF3-201ENST00000304778 GMPSP49915 693 aaPredicted RBP17.54■□□□□ 0.4
LONRF3-201ENST00000304778 MICALL2Q8IY33 904 aa17.54■□□□□ 0.4
LONRF3-201ENST00000304778 TRAF3IP3Q9Y228 551 aa17.54■□□□□ 0.4
LONRF3-201ENST00000304778 CES2O00748 559 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 KIF3CO14782 793 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 RPS12P25398 132 aaKnown RBP17.53■□□□□ 0.4
LONRF3-201ENST00000304778 PTK2Q05397 1052 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 TNFAIP1Q13829 316 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 TBC1D10BQ4KMP7 808 aaPredicted RBP17.53■□□□□ 0.4
LONRF3-201ENST00000304778 DPY19L2P1Q6NXN4 242 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 OTOP1Q7RTM1 612 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 FRMD5Q7Z6J6 570 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 FAM228AQ86W67 206 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 PARP9Q8IXQ6 854 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 IQCKQ8N0W5 287 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 USP38Q8NB14 1042 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 POLR3CQ9BUI4 534 aaPredicted RBP17.53■□□□□ 0.4
LONRF3-201ENST00000304778 GJA3Q9Y6H8 435 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 A0A1B0GUA9 196 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 CFAP58Q5T655 872 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 IRF2BP2Q7Z5L9 587 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 CCT8L2Q96SF2 557 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 PAGR1Q9BTK6 254 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 ARMCX3Q9UH62 379 aaPredicted RBP17.53■□□□□ 0.4
LONRF3-201ENST00000304778 CCPG1Q9ULG6 757 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 ZNF536O15090 1300 aa17.53■□□□□ 0.4
LONRF3-201ENST00000304778 CHMP2AO43633 222 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 SKAP2O75563 359 aaPredicted RBP17.52■□□□□ 0.4
LONRF3-201ENST00000304778 PSMD10O75832 226 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 ACTN1P12814 892 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 EZRP15311 586 aaKnown RBP17.52■□□□□ 0.4
LONRF3-201ENST00000304778 HPDP32754 393 aaPredicted RBP17.52■□□□□ 0.4
LONRF3-201ENST00000304778 TNNC1P63316 161 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 MAP2K1Q02750 393 aaPredicted RBP17.52■□□□□ 0.4
LONRF3-201ENST00000304778 PLCB4Q15147 1175 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 C11orf91Q3C1V1 193 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 CHADLQ6NUI6 762 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 OR2W6PQ8NHA6 318 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 CASKIN2Q8WXE0 1202 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 REEP2Q9BRK0 252 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 BHMT2Q9H2M3 363 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 TMEM59LQ9UK28 342 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 BZW2Q9Y6E2 419 aaKnown RBP17.52■□□□□ 0.4
LONRF3-201ENST00000304778 BRCA1P38398 1863 aaKnown RBP17.52■□□□□ 0.4
LONRF3-201ENST00000304778 RTN2O75298 545 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 AFPP02771 609 aaKnown RBP17.52■□□□□ 0.4
LONRF3-201ENST00000304778 ICAM1P05362 532 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 UCHL3P15374 230 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 CTTNQ14247 550 aaKnown RBP17.52■□□□□ 0.4
LONRF3-201ENST00000304778 NAA25Q14CX7 972 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 KNOP1Q1ED39 458 aaKnown RBP17.52■□□□□ 0.4
LONRF3-201ENST00000304778 SPRED3Q2MJR0 410 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 CYB5D1Q6P9G0 228 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 ZNF571Q7Z3V5 609 aaPredicted RBP17.52■□□□□ 0.4
LONRF3-201ENST00000304778 WHAMMQ8TF30 809 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 TAF4BQ92750 862 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 SLC5A5Q92911 643 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 SPAG5Q96R06 1193 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 EHMT1Q9H9B1 1298 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 HACL1Q9UJ83 578 aa17.52■□□□□ 0.4
LONRF3-201ENST00000304778 RPSAP08865 295 aaKnown RBP17.52■□□□□ 0.39
LONRF3-201ENST00000304778 SLC9A1P19634 815 aa17.52■□□□□ 0.39
LONRF3-201ENST00000304778 PRELPP51888 382 aa17.52■□□□□ 0.39
LONRF3-201ENST00000304778 CCNHP51946 323 aaPredicted RBP17.52■□□□□ 0.39
LONRF3-201ENST00000304778 SARNPP82979 210 aaKnown RBP17.52■□□□□ 0.39
LONRF3-201ENST00000304778 PTGISQ16647 500 aa17.52■□□□□ 0.39
LONRF3-201ENST00000304778 CEP55Q53EZ4 464 aa17.52■□□□□ 0.39
LONRF3-201ENST00000304778 EPM2AIP1Q7L775 607 aaPredicted RBP17.52■□□□□ 0.39
LONRF3-201ENST00000304778 NLRP14Q86W24 1093 aa17.52■□□□□ 0.39
LONRF3-201ENST00000304778 MYCBPAPQ8TBZ2 947 aa17.52■□□□□ 0.39
LONRF3-201ENST00000304778 CNOT7Q9UIV1 285 aaKnown RBP17.52■□□□□ 0.39
LONRF3-201ENST00000304778 MYBP10242 640 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 ARP10275 920 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 RPS6KA1Q15418 735 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 SFR1Q86XK3 245 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 UPF1Q92900 1129 aaKnown RBP eCLIP17.51■□□□□ 0.39
LONRF3-201ENST00000304778 HOOK2Q96ED9 719 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 HSD17B14Q9BPX1 270 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 WDR46O15213 610 aaKnown RBP17.51■□□□□ 0.39
LONRF3-201ENST00000304778 RAD51CO43502 376 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 PPP1R37O75864 691 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 IRX1P78414 480 aaPredicted RBP17.51■□□□□ 0.39
LONRF3-201ENST00000304778 EXOC3L4Q17RC7 722 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 TPH2Q8IWU9 490 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 CD302Q8IX05 232 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 PIGOQ8TEQ8 1089 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 DYDC2Q96IM9 177 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 RUSC1Q9BVN2 902 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 GOLPH3Q9H4A6 298 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 PPANQ9NQ55 473 aaKnown RBP17.51■□□□□ 0.39
LONRF3-201ENST00000304778 RABGAP1Q9Y3P9 1069 aa17.51■□□□□ 0.39
LONRF3-201ENST00000304778 KCNK3O14649 394 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 ATP2C2O75185 946 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 SLITRK3O94933 977 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 KIF4AO95239 1232 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 EYA4O95677 639 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 XRCC5P13010 732 aaKnown RBP17.5■□□□□ 0.39
LONRF3-201ENST00000304778 PON1P27169 355 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms