RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TADA2BQ86TJ2 420 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 ADGRF4Q8IZF3 695 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 TTC13Q8NBP0 860 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 CCDC138Q96M89 665 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 FGFR1OP2Q9NVK5 253 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 FEM1BQ9UK73 627 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 ARHGEF37A1IGU5 675 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 DENND3A2RUS2 1198 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 CALB1P05937 261 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 FOXO4P98177 505 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 RTKN2Q8IZC4 609 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 GUF1Q8N442 669 aaKnown RBP14.89□□□□□ -0.03
PRKCB-201ENST00000303531 EXT2Q93063 718 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 ANLNQ9NQW6 1124 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 ATP1A1P05023 1023 aaKnown RBP14.89□□□□□ -0.03
PRKCB-201ENST00000303531 SETSIPP0DME0 302 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 MAGEA9P43362 315 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 OCRLQ01968 901 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 CAV1Q03135 178 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 MLXIPLQ9NP71 852 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 INPP5FQ9Y2H2 1132 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 HEY1Q9Y5J3 304 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 GUCY1A2P33402 732 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 IREB2P48200 963 aaKnown RBP14.89□□□□□ -0.03
PRKCB-201ENST00000303531 TAF1BQ53T94 588 aaPredicted RBP14.89□□□□□ -0.03
PRKCB-201ENST00000303531 CATSPER4Q7RTX7 472 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 HIPK4Q8NE63 616 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 NARFQ9UHQ1 456 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 EPHB1P54762 984 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 SCARF1Q14162 830 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 MAPK6Q16659 721 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 KIAA1841Q6NSI8 718 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 FTLP02792 175 aaPredicted RBP14.89□□□□□ -0.03
PRKCB-201ENST00000303531 PPP2R2AP63151 447 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 GRAMD1BQ3KR37 738 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 TSGA10IPQ3SY00 556 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 WDR75Q8IWA0 830 aaKnown RBP14.89□□□□□ -0.03
PRKCB-201ENST00000303531 ASNSD1Q9NWL6 643 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 PFDN1O60925 122 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 SOX5P35711 763 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 TFDP2Q14188 446 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 STXBP2Q15833 593 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 METTL16Q86W50 562 aaKnown RBP14.88□□□□□ -0.03
PRKCB-201ENST00000303531 DHX38Q92620 1227 aaKnown RBP14.88□□□□□ -0.03
PRKCB-201ENST00000303531 UBE4BO95155 1302 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 NRKQ7Z2Y5 1582 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 GYG2O15488 501 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 C21orf2O43822 256 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 EEF1B2P24534 225 aaKnown RBP14.88□□□□□ -0.03
PRKCB-201ENST00000303531 INPP1P49441 399 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 MTF1Q14872 753 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 QRICH1Q2TAL8 776 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 KIF2CQ99661 725 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 ISCA1Q9BUE6 129 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 CLTCL1P53675 1640 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 TSPOAP1O95153 1857 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 BCORL1Q5H9F3 1711 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 LRRC7Q96NW7 1537 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 SPATA31A3Q5VYP0 1347 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 A0A1W2PQC6 194 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 KRT38O76015 456 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 MKRN3Q13064 507 aaKnown RBP14.88□□□□□ -0.03
PRKCB-201ENST00000303531 NAALADL2Q58DX5 795 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 TAF1DQ9H5J8 278 aaPredicted RBP14.88□□□□□ -0.03
PRKCB-201ENST00000303531 ZCCHC17Q9NP64 241 aaKnown RBP14.88□□□□□ -0.03
PRKCB-201ENST00000303531 NOP53Q9NZM5 478 aaKnown RBP14.88□□□□□ -0.03
PRKCB-201ENST00000303531 KLHL8Q9P2G9 620 aaPredicted RBP14.88□□□□□ -0.03
PRKCB-201ENST00000303531 NOC2LQ9Y3T9 749 aaKnown RBP14.88□□□□□ -0.03
PRKCB-201ENST00000303531 CTIFO43310 598 aaKnown RBP14.88□□□□□ -0.03
PRKCB-201ENST00000303531 KRT76Q01546 638 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 NR1H3Q13133 447 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 TTC25Q96NG3 672 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 POLE2P56282 527 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 TMEM60Q9H2L4 133 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 STRIP2Q9ULQ0 834 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 ZCCHC11Q5TAX3 1644 aaKnown RBP14.88□□□□□ -0.03
PRKCB-201ENST00000303531 GLI2P10070 1586 aa14.88□□□□□ -0.03
PRKCB-201ENST00000303531 ZNF568Q3ZCX4 644 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 KRT39Q6A163 491 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 TTLL6Q8N841 843 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 VPS39Q96JC1 886 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 IQGAP3Q86VI3 1631 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 MED14O60244 1454 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 GMNCA6NCL1 334 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 H0Y3Z8 333 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 CHRNA3P32297 505 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 DPF2Q92785 391 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 WDR24Q96S15 920 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 FBXO2Q9UK22 296 aaPredicted RBP14.87□□□□□ -0.03
PRKCB-201ENST00000303531 PI4K2BG5E9Z4 385 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 CHEK2O96017 543 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 HSPA8P11142 646 aaKnown RBP14.87□□□□□ -0.03
PRKCB-201ENST00000303531 CYP19A1P11511 503 aaPredicted RBP14.87□□□□□ -0.03
PRKCB-201ENST00000303531 YWHAHQ04917 246 aaPredicted RBP14.87□□□□□ -0.03
PRKCB-201ENST00000303531 PARD3BQ8TEW8 1205 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 FAM167AQ96KS9 214 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 SETD1BQ9UPS6 1966 aaKnown RBP14.87□□□□□ -0.03
PRKCB-201ENST00000303531 KLHL38Q2WGJ6 581 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 DALRD3Q5D0E6 543 aaKnown RBP14.87□□□□□ -0.03
PRKCB-201ENST00000303531 STAG2Q8N3U4 1231 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms