RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ACTN1P12814 892 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 NPEPPSP55786 919 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 CHMP4BP1P59074 171 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 DMP1Q13316 513 aaPredicted RBP21.2■□□□□ 0.98
HOXC4-201ENST00000303406 FAM102BQ5T8I3 360 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 UTP14CQ5TAP6 766 aaKnown RBP21.2■□□□□ 0.98
HOXC4-201ENST00000303406 MAEAQ7L5Y9 396 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 IRF2BP2Q7Z5L9 587 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 MAP4K3Q8IVH8 894 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 XXYLT1Q8NBI6 393 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 CNKSR2Q8WXI2 1034 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 CEP170P1Q96L14 293 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 IKZF4Q9H2S9 585 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 ARGLU1Q9NWB6 273 aaPredicted RBP21.2■□□□□ 0.98
HOXC4-201ENST00000303406 LRRC37A2A6NM11 1700 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 FERP16591 822 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 PEX3P56589 373 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 SWSAP1Q6NVH7 229 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 FBXO38Q6PIJ6 1188 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 TMEM161BQ8NDZ6 487 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 ALS2CR12Q96Q35 445 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 CCDC94Q9BW85 323 aaPredicted RBP21.19■□□□□ 0.98
HOXC4-201ENST00000303406 JRKLQ9Y4A0 524 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 SAR1BQ9Y6B6 198 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 UNCXA6NJT0 531 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 BTNL10A8MVZ5 291 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 PRLRP16471 622 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 EPHX2P34913 555 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 PRKCEQ02156 737 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 APBA1Q02410 837 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 GFPT1Q06210 699 aaPredicted RBP21.19■□□□□ 0.98
HOXC4-201ENST00000303406 FASTKD5Q7L8L6 764 aaKnown RBP21.19■□□□□ 0.98
HOXC4-201ENST00000303406 CCDC60Q8IWA6 550 aaPredicted RBP21.19■□□□□ 0.98
HOXC4-201ENST00000303406 FAM133AQ8N9E0 248 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 OTUD5Q96G74 571 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 RPGRIP1Q96KN7 1286 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 MPHOSPH6Q99547 160 aaKnown RBP21.19■□□□□ 0.98
HOXC4-201ENST00000303406 ATP6V0A4Q9HBG4 840 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 TBX20Q9UMR3 447 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 TFR2Q9UP52 801 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 USP20Q9Y2K6 914 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 MAFBQ9Y5Q3 323 aaPredicted RBP21.19■□□□□ 0.98
HOXC4-201ENST00000303406 SCN4AP35499 1836 aa21.19■□□□□ 0.98
HOXC4-201ENST00000303406 IGKV6D-21A0A0A0MT36 114 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 LOC102724159A0A0B4J2E5 919 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 CTAGE15A4D2H0 777 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 TMEM150BA6NC51 233 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 CNMDO75829 334 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 CTAGE8P0CG41 777 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 STAT1P42224 750 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 NPTX2P47972 431 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 MYL7Q01449 175 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 CKAP4Q07065 602 aaKnown RBP21.18■□□□□ 0.98
HOXC4-201ENST00000303406 PWP2Q15269 919 aaKnown RBP21.18■□□□□ 0.98
HOXC4-201ENST00000303406 IQCEQ6IPM2 695 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 DLK2Q6UY11 383 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 CTAGE6Q86UF2 777 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 CTAGE4Q8IX94 777 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 STK33Q9BYT3 514 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 ASCC2Q9H1I8 757 aaPredicted RBP21.18■□□□□ 0.98
HOXC4-201ENST00000303406 GPRC5CQ9NQ84 441 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 CYP26B1Q9NR63 512 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 HSPBP1Q9NZL4 362 aa21.18■□□□□ 0.98
HOXC4-201ENST00000303406 SLC16A4O15374 487 aa21.17■□□□□ 0.98
HOXC4-201ENST00000303406 ATP1A1P05023 1023 aaKnown RBP21.17■□□□□ 0.98
HOXC4-201ENST00000303406 TGFB3P10600 412 aa21.17■□□□□ 0.98
HOXC4-201ENST00000303406 CNTN2Q02246 1040 aa21.17■□□□□ 0.98
HOXC4-201ENST00000303406 CETN1Q12798 172 aa21.17■□□□□ 0.98
HOXC4-201ENST00000303406 ARMC9Q7Z3E5 817 aa21.17■□□□□ 0.98
HOXC4-201ENST00000303406 KMT5AQ9NQR1 393 aa21.17■□□□□ 0.98
HOXC4-201ENST00000303406 PPME1Q9Y570 386 aa21.17■□□□□ 0.98
HOXC4-201ENST00000303406 SYNGAP1Q96PV0 1343 aa21.17■□□□□ 0.98
HOXC4-201ENST00000303406 MACROD2A1Z1Q3 448 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 SOWAHBA6NEL2 793 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 TUBBP07437 444 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 CCDC172P0C7W6 258 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 OSBPP22059 807 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 VAMP7P51809 220 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 SP2Q02086 613 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 MOGSQ13724 837 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 NEDD9Q14511 834 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 TEX35Q5T0J7 233 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 VPS36Q86VN1 386 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 NOX5Q96PH1 765 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 INTS2Q9H0H0 1204 aaKnown RBP21.16■□□□□ 0.98
HOXC4-201ENST00000303406 ZNF302Q9NR11 478 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 SEPT9Q9UHD8 586 aaPredicted RBP21.16■□□□□ 0.98
HOXC4-201ENST00000303406 NENFQ9UMX5 172 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 DUSP10Q9Y6W6 482 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 DOCK5Q9H7D0 1870 aa21.16■□□□□ 0.98
HOXC4-201ENST00000303406 CBWD6Q4V339 395 aa21.15■□□□□ 0.98
HOXC4-201ENST00000303406 CBWD3Q5JTY5 395 aa21.15■□□□□ 0.98
HOXC4-201ENST00000303406 CBWD5Q5RIA9 395 aa21.15■□□□□ 0.98
HOXC4-201ENST00000303406 KCNV1Q6PIU1 500 aa21.15■□□□□ 0.98
HOXC4-201ENST00000303406 NCAPG2Q86XI2 1143 aa21.15■□□□□ 0.98
HOXC4-201ENST00000303406 MSANTD4Q8NCY6 345 aa21.15■□□□□ 0.98
HOXC4-201ENST00000303406 GTF3C2Q8WUA4 911 aaPredicted RBP21.15■□□□□ 0.98
HOXC4-201ENST00000303406 CLMNQ96JQ2 1002 aa21.15■□□□□ 0.98
HOXC4-201ENST00000303406 CBWD1Q9BRT8 395 aa21.15■□□□□ 0.98
HOXC4-201ENST00000303406 NIFKQ9BYG3 293 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms