RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 OLFML3Q9NRN5 406 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 ARHGAP28Q9P2N2 729 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 IDEP14735 1019 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 CD44P16070 742 aaKnown RBP10.49□□□□□ -0.73
RFX3-201ENST00000302303 NMT1P30419 496 aaKnown RBP10.49□□□□□ -0.73
RFX3-201ENST00000302303 GPC3P51654 580 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 NCKAP1LP55160 1127 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 PEX3P56589 373 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 POU5F1BQ06416 359 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 KCNA1Q09470 495 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 TMEM62Q0P6H9 643 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 MBTPS1Q14703 1052 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 FAM26DQ5JW98 314 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
RFX3-201ENST00000302303 RETREG2Q8NC44 543 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 TMEM161BQ8NDZ6 487 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 SPIRE2Q8WWL2 714 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 TCP11Q8WWU5 503 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 PSPC1Q8WXF1 523 aaKnown RBP10.49□□□□□ -0.73
RFX3-201ENST00000302303 DRC1Q96MC2 740 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 JPH2Q9BR39 696 aaPredicted RBP10.49□□□□□ -0.73
RFX3-201ENST00000302303 KIFC3Q9BVG8 833 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 FAM49AQ9H0Q0 323 aaPredicted RBP10.49□□□□□ -0.73
RFX3-201ENST00000302303 IKZF4Q9H2S9 585 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 C17orf75Q9HAS0 396 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 PARVGQ9HBI0 331 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 TBC1D7Q9P0N9 293 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 PCDH10Q9P2E7 1040 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 GDAQ9Y2T3 454 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 COL4A3BPQ9Y5P4 624 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 KAT6AQ92794 2004 aa10.49□□□□□ -0.73
RFX3-201ENST00000302303 A0A087WZ62 844 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 TTLL13PA6NNM8 815 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 PPP1R3GB7ZBB8 358 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 BIN1O00499 593 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 CSDE1O75534 798 aaKnown RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 MYBP10242 640 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 MAPTP10636 758 aaKnown RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 CKBP12277 381 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 ITGB8P26012 769 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 NAMPTP43490 491 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 NLRP11P59045 1033 aaKnown RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 PTENP60484 403 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 MXD4Q14582 209 aaPredicted RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 AMHR2Q16671 573 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 KIZQ2M2Z5 673 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 ZSCAN23Q3MJ62 389 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 ZC2HC1CQ53FD0 456 aaPredicted RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 HERC4Q5GLZ8 1057 aaPredicted RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 ODR4Q5SWX8 454 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 CDCA2Q69YH5 1023 aaPredicted RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 TAF2Q6P1X5 1199 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 RHPN2Q8IUC4 686 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 CCDC65Q8IXS2 484 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 SMYD4Q8IYR2 804 aaPredicted RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 NME8Q8N427 588 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 MYCT1Q8N699 235 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 SCFD1Q8WVM8 642 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 SMARCE1Q969G3 411 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 CCDC43Q96MW1 224 aaKnown RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 PPP1R16BQ96T49 567 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 FDXACB1Q9BRP7 624 aaPredicted RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 NFKBIZQ9BYH8 718 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 CCDC113Q9H0I3 377 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 ST6GALNAC4Q9H4F1 302 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 SLC39A2Q9NP94 309 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 SEL1LQ9UBV2 794 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 TBX21Q9UL17 535 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 UMODL1Q5DID0 1318 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 SIP14410 1827 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 ALPK3Q96L96 1907 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 SLC16A4O15374 487 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 ASAP2O43150 1006 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 PQBP1O60828 265 aaKnown RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 FAM13AO94988 1023 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 KRT18P05783 430 aaKnown RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 SRGAP2CP0DJJ0 459 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 GAP43P17677 238 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 TMOD1P28289 359 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 DNM2P50570 870 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 GTF2BQ00403 316 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 PSMD2Q13200 908 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 COBLL1Q53SF7 1204 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 FAM26FQ5R3K3 315 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 ZNF618Q5T7W0 954 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 ZNF658Q5TYW1 1059 aaPredicted RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 HAUS6Q7Z4H7 955 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 RNF149Q8NC42 400 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 ZNF507Q8TCN5 953 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 ZHX3Q9H4I2 956 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 LARSQ9P2J5 1176 aaKnown RBP10.48□□□□□ -0.73
RFX3-201ENST00000302303 AKT3Q9Y243 479 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 USP20Q9Y2K6 914 aa10.48□□□□□ -0.73
RFX3-201ENST00000302303 SYCE3A1L190 88 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 TRIM43BA6NCK2 446 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 TBCAO75347 108 aaKnown RBP10.47□□□□□ -0.73
RFX3-201ENST00000302303 SMC2O95347 1197 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 PRCPP42785 496 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 MRPS6P82932 125 aaKnown RBP10.47□□□□□ -0.73
RFX3-201ENST00000302303 MBTD1Q05BQ5 628 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms