RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 EPHA7Q15375 998 aa20.69■□□□□ 0.9
TSR1-201ENST00000301364 RNPC3Q96LT9 517 aaKnown RBP20.69■□□□□ 0.9
TSR1-201ENST00000301364 TAF11Q15544 211 aa20.69■□□□□ 0.9
TSR1-201ENST00000301364 OR6B2Q6IFH4 312 aa20.69■□□□□ 0.9
TSR1-201ENST00000301364 FAM149B1Q96BN6 582 aa20.69■□□□□ 0.9
TSR1-201ENST00000301364 HVCN1Q96D96 273 aa20.69■□□□□ 0.9
TSR1-201ENST00000301364 RMDN3Q96TC7 470 aa20.69■□□□□ 0.9
TSR1-201ENST00000301364 ZNF408Q9H9D4 720 aa20.69■□□□□ 0.9
TSR1-201ENST00000301364 MYO3BQ8WXR4 1341 aa20.69■□□□□ 0.9
TSR1-201ENST00000301364 CALB1P05937 261 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 SKIP12755 728 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 ATG16L1Q676U5 607 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 LRIG3Q6UXM1 1119 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 SLC16A4O15374 487 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 MYBL1P10243 752 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 ESRRAP11474 423 aaPredicted RBP20.68■□□□□ 0.9
TSR1-201ENST00000301364 FBXO33Q7Z6M2 555 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 MMGT1Q8N4V1 131 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 POLD4Q9HCU8 107 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 VCX3AQ9NNX9 186 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 KRT37O76014 449 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 NKX1-1Q15270 411 aaPredicted RBP20.68■□□□□ 0.9
TSR1-201ENST00000301364 ZBTB33Q86T24 672 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 NACA2Q9H009 215 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 PSMA2P25787 234 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 SUPT20HL1Q3ZLR7 823 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 LXNQ9BS40 222 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 TMEM60Q9H2L4 133 aa20.68■□□□□ 0.9
TSR1-201ENST00000301364 TDRD3Q9H7E2 651 aaKnown RBP20.68■□□□□ 0.9
TSR1-201ENST00000301364 SLIT1O75093 1534 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 VWDEQ8N2E2 1590 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 GPC4O75487 556 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 GABPAQ06546 454 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 BYSLQ13895 437 aaKnown RBP20.67■□□□□ 0.9
TSR1-201ENST00000301364 STK33Q9BYT3 514 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 AKT3Q9Y243 479 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 UCHL3P15374 230 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 ECE1P42892 770 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 EPM2AIP1Q7L775 607 aaPredicted RBP20.67■□□□□ 0.9
TSR1-201ENST00000301364 NOA1Q8NC60 698 aaKnown RBP20.67■□□□□ 0.9
TSR1-201ENST00000301364 HEMGNQ9BXL5 484 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 ZBED1O96006 694 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 TRIM49P0CI25 452 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 TRIM49CP0CI26 452 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 MDH1P40925 334 aaKnown RBP20.67■□□□□ 0.9
TSR1-201ENST00000301364 SULF1Q8IWU6 871 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 RTKN2Q8IZC4 609 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 SYN2Q92777 582 aaPredicted RBP20.67■□□□□ 0.9
TSR1-201ENST00000301364 NCAPGQ9BPX3 1015 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 ITSN1Q15811 1721 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 ESYT2A0FGR8 921 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 DENND3A2RUS2 1198 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 FAM196BA6NMK8 535 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 MMP10P09238 476 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 MYO1EQ12965 1108 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 DRP2Q13474 957 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 TRIM59Q8IWR1 403 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 SRRM1Q8IYB3 904 aaKnown RBP20.67■□□□□ 0.9
TSR1-201ENST00000301364 AGPAT1Q99943 283 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 TRIM55Q9BYV6 548 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 GINM1Q9NU53 330 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 AFG3L2Q9Y4W6 797 aa20.67■□□□□ 0.9
TSR1-201ENST00000301364 FLT1P17948 1338 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 TBXAS1P24557 533 aaPredicted RBP20.66■□□□□ 0.9
TSR1-201ENST00000301364 TFDP2Q14188 446 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 DAGLBQ8NCG7 672 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 RPF1Q9H9Y2 349 aaKnown RBP20.66■□□□□ 0.9
TSR1-201ENST00000301364 STRIP2Q9ULQ0 834 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 EMSYQ7Z589 1322 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 EIF3HO15372 352 aaKnown RBP eCLIP20.66■□□□□ 0.9
TSR1-201ENST00000301364 NTSR2O95665 410 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 SRGAP2BP0DMP2 458 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 BRAFP15056 766 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 FXR2P51116 673 aaKnown RBP eCLIP20.66■□□□□ 0.9
TSR1-201ENST00000301364 NAB2Q15742 525 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 ZNF449Q6P9G9 518 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 TRIM72Q6ZMU5 477 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 C16orf86Q6ZW13 317 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 EPN3Q9H201 632 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 SLC38A10Q9HBR0 1119 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 RASA1P20936 1047 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 SP8Q8IXZ3 490 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 FGFR1OP2Q9NVK5 253 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 WDR91A4D1P6 747 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 FOXP2O15409 715 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 GUCY1A3Q02108 690 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 KRT27Q7Z3Y8 459 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 CCNYQ8ND76 341 aa20.66■□□□□ 0.9
TSR1-201ENST00000301364 FRMD3A2A2Y4 597 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 SAT1P21673 171 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 ZNF667Q5HYK9 610 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 C11orf70Q9BRQ4 267 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 MID2Q9UJV3 735 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 MAP2P11137 1827 aaKnown RBP20.65■□□□□ 0.9
TSR1-201ENST00000301364 MEFVO15553 781 aaPredicted RBP20.65■□□□□ 0.9
TSR1-201ENST00000301364 LMNAP02545 664 aaKnown RBP20.65■□□□□ 0.9
TSR1-201ENST00000301364 PSMC5P62195 406 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 ZNF746Q6NUN9 644 aaPredicted RBP20.65■□□□□ 0.9
TSR1-201ENST00000301364 ARHGAP27Q6ZUM4 889 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 BZW1Q7L1Q6 419 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms