RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CDC42EP5Q6NZY7 148 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 APBB1IPQ7Z5R6 666 aaPredicted RBP14.32□□□□□ -0.12
CASC4-201ENST00000299957 SPATA20Q8TB22 786 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 RAVER2Q9HCJ3 691 aaKnown RBP14.32□□□□□ -0.12
CASC4-201ENST00000299957 POLLQ9UGP5 575 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 TMEM150BA6NC51 233 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 IPO5O00410 1097 aaKnown RBP14.32□□□□□ -0.12
CASC4-201ENST00000299957 C21orf2O43822 256 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 PBX1P40424 430 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 NPEPPSP55786 919 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 BFSP1Q12934 665 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 RCN2Q14257 317 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 RASA3Q14644 834 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 AOC3Q16853 763 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 APTXQ7Z2E3 356 aaKnown RBP14.32□□□□□ -0.12
CASC4-201ENST00000299957 PALM2Q8IXS6 379 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 MYCBPAPQ8TBZ2 947 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 FBXO25Q8TCJ0 367 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 C18orf8Q96DM3 657 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 FAM213AQ9BRX8 229 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 KCND1Q9NSA2 647 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.32□□□□□ -0.12
CASC4-201ENST00000299957 ZBTB12Q9Y330 459 aaPredicted RBP14.32□□□□□ -0.12
CASC4-201ENST00000299957 ANKRD26Q9UPS8 1709 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 SYNJ2BP-COX16A0A087WUM0 186 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 TISP43B9A030 160 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 HIP1RO75146 1068 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 BRAFP15056 766 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 PIK3CAP42336 1068 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 ERVK-9P63128 1117 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 TTMPQ5BVD1 217 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 ANKRD20A3Q5VUR7 823 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 TRIM59Q8IWR1 403 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 SCYL3Q8IZE3 742 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 DEPTORQ8TB45 409 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 JDP2Q8WYK2 163 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 ACSF2Q96CM8 615 aaPredicted RBP14.31□□□□□ -0.12
CASC4-201ENST00000299957 RILPQ96NA2 401 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 GPRC5CQ9NQ84 441 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 KCNQ5Q9NR82 932 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 COX16Q9P0S2 106 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 EXOC7Q9UPT5 735 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 NWD1Q149M9 1564 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 FOXN3O00409 490 aaPredicted RBP14.31□□□□□ -0.12
CASC4-201ENST00000299957 BAG2O95816 211 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 SOX5P35711 763 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 KYNUQ16719 465 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 BBS9Q3SYG4 887 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 ZFPM1Q8IX07 1006 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 BCAS3Q9H6U6 928 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 TTLL3Q9Y4R7 772 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 ALG6Q9Y672 507 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 EXOC1LA0A1B0GW35 172 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 TCP11X1B4DZS4 312 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 PON1P27169 355 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 ATP5DP30049 168 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 MFAP3P55082 362 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 IGBP1P78318 339 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 PTGISQ16647 500 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 ZNF564Q8TBZ8 553 aaPredicted RBP14.31□□□□□ -0.12
CASC4-201ENST00000299957 ZNF526Q8TF50 670 aaPredicted RBP14.31□□□□□ -0.12
CASC4-201ENST00000299957 ZNF384Q8TF68 577 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 CPA5Q8WXQ8 436 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 STMN2Q93045 179 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 C3P01024 1663 aa14.31□□□□□ -0.12
CASC4-201ENST00000299957 CAND2O75155 1236 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 ALDH1B1P30837 517 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 ECE1P42892 770 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 PLA2G4FQ68DD2 849 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 RFFLQ8WZ73 363 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 POP1Q99575 1024 aaKnown RBP14.3□□□□□ -0.12
CASC4-201ENST00000299957 KLF6Q99612 283 aaPredicted RBP14.3□□□□□ -0.12
CASC4-201ENST00000299957 PAGR1Q9BTK6 254 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 CALN1Q9BXU9 219 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 ZNF341Q9BYN7 854 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 PARP2Q9UGN5 583 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 ECM1Q16610 540 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 CHMP6Q96FZ7 201 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 GAP43P17677 238 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 MARK3P27448 753 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 CHRNA5P30532 468 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 FMO5P49326 533 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 RWDD2BP57060 319 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 YWHAGP61981 247 aaKnown RBP eCLIP14.3□□□□□ -0.12
CASC4-201ENST00000299957 TFAMQ00059 246 aaKnown RBP14.3□□□□□ -0.12
CASC4-201ENST00000299957 NPY5RQ15761 445 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 RNF207Q6ZRF8 634 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 SEPT14Q6ZU15 432 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 EPS8L3Q8TE67 593 aaKnown RBP14.3□□□□□ -0.12
CASC4-201ENST00000299957 SLC20A1Q8WUM9 679 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 RSAD2Q8WXG1 361 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 SEC16BQ96JE7 1060 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 ZWILCHQ9H900 591 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 SAYSD1Q9NPB0 183 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 DDX4Q9NQI0 724 aaKnown RBP14.3□□□□□ -0.12
CASC4-201ENST00000299957 FGFR1OP2Q9NVK5 253 aa14.3□□□□□ -0.12
CASC4-201ENST00000299957 RASA4BC9J798 803 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 RASA4O43374 803 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 COMTP21964 271 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 VAMP7P51809 220 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms