RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TRAPPC11Q7Z392 1133 aa10.12□□□□□ -0.79
PRDM9-201ENST00000296682 CDR2LQ86X02 465 aaPredicted RBP10.12□□□□□ -0.79
PRDM9-201ENST00000296682 AGBL3Q8NEM8 1001 aa10.12□□□□□ -0.79
PRDM9-201ENST00000296682 FUT8Q9BYC5 575 aa10.12□□□□□ -0.79
PRDM9-201ENST00000296682 AGPAT3Q9NRZ7 376 aa10.12□□□□□ -0.79
PRDM9-201ENST00000296682 RBM12Q9NTZ6 932 aaKnown RBP10.12□□□□□ -0.79
PRDM9-201ENST00000296682 FRMD3A2A2Y4 597 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 TGFB1I1O43294 461 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 EVI5O60447 810 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 GAP43P17677 238 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 ITGB3BPQ13352 177 aaPredicted RBP10.11□□□□□ -0.79
PRDM9-201ENST00000296682 UGCGQ16739 394 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 MCTP2Q6DN12 878 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 ZNF720Q7Z2F6 126 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 GLG1Q92896 1179 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 KAT5Q92993 513 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 OTUD5Q96G74 571 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 PLCB1Q9NQ66 1216 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 NFU1Q9UMS0 254 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 RLFQ13129 1914 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 DDNO94850 711 aaPredicted RBP10.11□□□□□ -0.79
PRDM9-201ENST00000296682 HOXD13P35453 343 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 IGBP1P78318 339 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 SLC18A3Q16572 532 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 DCAF15Q66K64 600 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 C1orf186Q6ZWK4 172 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 SLC35C1Q96A29 364 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 OSGEPQ9NPF4 335 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 TOPORSQ9NS56 1045 aaPredicted RBP10.11□□□□□ -0.79
PRDM9-201ENST00000296682 RGS17Q9UGC6 210 aaPredicted RBP10.11□□□□□ -0.79
PRDM9-201ENST00000296682 AJAP1Q9UKB5 411 aaPredicted RBP10.11□□□□□ -0.79
PRDM9-201ENST00000296682 H3BQF6 201 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 TCP1P17987 556 aaKnown RBP10.11□□□□□ -0.79
PRDM9-201ENST00000296682 KCNA3P22001 575 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 FMO5P49326 533 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 USP14P54578 494 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 ODF2Q5BJF6 829 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 DDX42Q86XP3 938 aaKnown RBP eCLIP10.11□□□□□ -0.79
PRDM9-201ENST00000296682 CBWD2Q8IUF1 395 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 NLGN2Q8NFZ4 835 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 FAM213AQ9BRX8 229 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 POLR3CQ9BUI4 534 aaPredicted RBP10.11□□□□□ -0.79
PRDM9-201ENST00000296682 DDX47Q9H0S4 455 aaKnown RBP10.11□□□□□ -0.79
PRDM9-201ENST00000296682 ASTN1O14525 1302 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 PITPNM2Q9BZ72 1349 aa10.11□□□□□ -0.79
PRDM9-201ENST00000296682 LRRIQ3A6PVS8 624 aaPredicted RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 FOXN3O00409 490 aaPredicted RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 ZEB2O60315 1214 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 HEXIM1O94992 359 aaKnown RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 MYBL2P10244 700 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 ACOT2P49753 483 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 MRPS9P82933 396 aaKnown RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 CNTN2Q02246 1040 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 DMP1Q13316 513 aaPredicted RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 ZNF394Q53GI3 561 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 FRMD5Q7Z6J6 570 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 ZNF280CQ8ND82 737 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 TRPM4Q8TD43 1214 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 FNBP1Q96RU3 617 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 RANBP17Q9H2T7 1088 aaKnown RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 CNTNAP1P78357 1384 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 MYH10P35580 1976 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 KRIT1O00522 736 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 WDR46O15213 610 aaKnown RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 SRGAP2CP0DJJ0 459 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 ATP1A2P50993 1020 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 POLGP54098 1239 aaPredicted RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 AMPD2Q01433 879 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 EDRF1Q3B7T1 1238 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 ZCWPW2Q504Y3 356 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 BTNL9Q6UXG8 535 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 ZBTB33Q86T24 672 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 SLC30A5Q8TAD4 765 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 HNRNPLLQ8WVV9 542 aaKnown RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 PSMD1Q99460 953 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 NUCKS1Q9H1E3 243 aaKnown RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 TUFT1Q9NNX1 390 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 TLDC2A0PJX2 215 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 NFKBIEO00221 500 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 MYCNP04198 464 aaPredicted RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 IRX3P78415 501 aaPredicted RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 TRADDQ15628 312 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 BEND6Q5SZJ8 279 aaPredicted RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 PPP4R3CPQ6ZMV5 832 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 LEKR1Q6ZMV7 388 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 SCLT1Q96NL6 688 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 GMLQ99445 158 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 PDCD2LQ9BRP1 358 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 INTS2Q9H0H0 1204 aaKnown RBP10.1□□□□□ -0.79
PRDM9-201ENST00000296682 RAB21Q9UL25 225 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 PCDHA2Q9Y5H9 948 aa10.1□□□□□ -0.79
PRDM9-201ENST00000296682 GOLGA6BA6NDN3 693 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 CYP26A1O43174 497 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 CIITAP33076 1130 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 MXI1P50539 228 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 GALCP54803 685 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 METTL13Q8N6R0 699 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 RBM46Q8TBY0 533 aaKnown RBP10.09□□□□□ -0.79
PRDM9-201ENST00000296682 SLC5A5Q92911 643 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 ACCSQ96QU6 501 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms