RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 KRT14P02533 472 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 PGM1P36871 562 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 MRPS35P82673 323 aaKnown RBP11.76□□□□□ -0.53
PBRM1-201ENST00000296302 DPYDQ12882 1025 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 PTGISQ16647 500 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 TRIM67Q6ZTA4 783 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 FRMD5Q7Z6J6 570 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 SGSM3Q96HU1 749 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 VPS39Q96JC1 886 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 TRPV6Q9H1D0 765 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 KIAA1586Q9HCI6 787 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 CYP26B1Q9NR63 512 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 NXF1Q9UBU9 619 aaKnown RBP11.76□□□□□ -0.53
PBRM1-201ENST00000296302 PALLDQ8WX93 1383 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 CCT8L1PA6NM43 557 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 ZBBXA8MT70 800 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 PHF20L1A8MW92 1017 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 LDHAP00338 332 aaKnown RBP11.76□□□□□ -0.53
PBRM1-201ENST00000296302 NCAPHQ15003 741 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 ANKRD40Q6AI12 368 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 STOX1Q6ZVD7 989 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 INTS2Q9H0H0 1204 aaKnown RBP11.76□□□□□ -0.53
PBRM1-201ENST00000296302 ADGRL3Q9HAR2 1447 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 GOLGA8IPA6NC78 632 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 GOLGA8JA6NMD2 632 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 CDH16O75309 829 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 CD58P19256 250 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 SOX5P35711 763 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 CUL3Q13618 768 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 IZUMO3Q5VZ72 239 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 LCA5Q86VQ0 697 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 NUDCD3Q8IVD9 361 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 NOA1Q8NC60 698 aaKnown RBP11.75□□□□□ -0.53
PBRM1-201ENST00000296302 FBXL13Q8NEE6 735 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 FAM20AQ96MK3 541 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 ZIM3Q96PE6 472 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 CCSER1Q9C0I3 900 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 PLA2R1Q13018 1463 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 PPIP5K2O43314 1243 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 CRKLP46109 303 aaKnown RBP11.75□□□□□ -0.53
PBRM1-201ENST00000296302 PDIA2Q13087 525 aaKnown RBP11.75□□□□□ -0.53
PBRM1-201ENST00000296302 WDR93Q6P2C0 686 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 APLFQ8IW19 511 aaPredicted RBP11.75□□□□□ -0.53
PBRM1-201ENST00000296302 RHOT1Q8IXI2 618 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 SLC26A7Q8TE54 656 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 CEP19Q96LK0 163 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 POLR3CQ9BUI4 534 aaPredicted RBP11.75□□□□□ -0.53
PBRM1-201ENST00000296302 WARS2Q9UGM6 360 aaKnown RBP11.75□□□□□ -0.53
PBRM1-201ENST00000296302 STRIP2Q9ULQ0 834 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 E9PMD0 336 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 LTKP29376 864 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 PCYT1AP49585 367 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 COPS2P61201 443 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 GRM4Q14833 912 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 TBC1D10BQ4KMP7 808 aaPredicted RBP11.75□□□□□ -0.53
PBRM1-201ENST00000296302 DCAF15Q66K64 600 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 REXO1L1PQ8IX06 675 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 CNPY4Q8N129 248 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 ING2Q9H160 280 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 ASAP1Q9ULH1 1129 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.75□□□□□ -0.53
PBRM1-201ENST00000296302 GPS1Q13098 491 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 TMC4Q7Z404 712 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 RASSF3Q86WH2 238 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 GLYCTKQ8IVS8 523 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 ZBED8Q8IZ13 594 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 SPICE1Q8N0Z3 855 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 PPCSQ9HAB8 311 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 RBM12Q9NTZ6 932 aaKnown RBP11.75□□□□□ -0.53
PBRM1-201ENST00000296302 BARHL2Q9NY43 387 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 SUN2Q9UH99 717 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 CLEC11AQ9Y240 323 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 SNX5Q9Y5X3 404 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
PBRM1-201ENST00000296302 LOC102724428A0A0B4J2F2 783 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 EIF4E1BA6NMX2 242 aaKnown RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 INO80B-WBP1J3KQ70 363 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 MAN1A2O60476 641 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 HNRNPCP07910 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 FGFR4P22455 802 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 GCLMP48507 274 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 SIK1P57059 783 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 HIC1Q14526 733 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 NIM1KQ8IY84 436 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 PPM1NQ8N819 430 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 ROPN1BQ9BZX4 212 aaPredicted RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 INO80BQ9C086 356 aaPredicted RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 TRABDQ9H4I3 376 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 ROPN1Q9HAT0 212 aaPredicted RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 SPC25Q9HBM1 224 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 TTC7AQ9ULT0 858 aaPredicted RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 CPDO75976 1380 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 A0A1W2PQJ5 194 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 SPDYE16A6NNV3 312 aaPredicted RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 POLD1P28340 1107 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 KRT17Q04695 432 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 DNAL1Q4LDG9 190 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 ATL2Q8NHH9 583 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 MS4A14Q96JA4 679 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms