RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 STK24Q9Y6E0 443 aa12.83□□□□□ -0.36
RHO-201ENST00000296271 RGPD3A6NKT7 1758 aaPredicted RBP12.83□□□□□ -0.36
RHO-201ENST00000296271 RGPD4Q7Z3J3 1758 aa12.83□□□□□ -0.36
RHO-201ENST00000296271 TARSL2A2RTX5 802 aaKnown RBP12.82□□□□□ -0.36
RHO-201ENST00000296271 QARSP47897 775 aaKnown RBP12.82□□□□□ -0.36
RHO-201ENST00000296271 GALCP54803 685 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 MYL7Q01449 175 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 PPARDQ03181 441 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 BFSP1Q12934 665 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 TRAF1Q13077 416 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 FAM102BQ5T8I3 360 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 ZNF746Q6NUN9 644 aaPredicted RBP12.82□□□□□ -0.36
RHO-201ENST00000296271 LRRC57Q8N9N7 239 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 LMO3Q8TAP4 145 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 AENQ8WTP8 325 aaKnown RBP12.82□□□□□ -0.36
RHO-201ENST00000296271 BSNDQ8WZ55 320 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 WRNIP1Q96S55 665 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 PXMP2Q9NR77 195 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 ODF2LQ9ULJ1 636 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 NENFQ9UMX5 172 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 RGS20O76081 388 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 ADRB2P07550 413 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 PAFAH1B1P43034 410 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
RHO-201ENST00000296271 XKR9Q5GH70 373 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 ARHGEF16Q5VV41 709 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 ZNF572Q7Z3I7 529 aaPredicted RBP12.82□□□□□ -0.36
RHO-201ENST00000296271 HAUS6Q7Z4H7 955 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 IFT81Q8WYA0 676 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 RPGRIP1Q96KN7 1286 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 TOPORSQ9NS56 1045 aaPredicted RBP12.82□□□□□ -0.36
RHO-201ENST00000296271 RNF146Q9NTX7 359 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 ZNF541Q9H0D2 1346 aa12.82□□□□□ -0.36
RHO-201ENST00000296271 ITGA4P13612 1032 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 SOX5P35711 763 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 PRKCIP41743 596 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 ZNF280AP59817 542 aaPredicted RBP12.81□□□□□ -0.36
RHO-201ENST00000296271 GUCY2DQ02846 1103 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 ANGEL2Q5VTE6 544 aaKnown RBP12.81□□□□□ -0.36
RHO-201ENST00000296271 C8orf74Q6P047 294 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 ANO5Q75V66 913 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 CBWD2Q8IUF1 395 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 TPCN2Q8NHX9 752 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 TRPM4Q8TD43 1214 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 NFU1Q9UMS0 254 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 COL11A1P12107 1806 aaPredicted RBP12.81□□□□□ -0.36
RHO-201ENST00000296271 CCDC169A6NNP5 214 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 ZNF862O60290 1169 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 CTNND1O60716 968 aaKnown RBP12.81□□□□□ -0.36
RHO-201ENST00000296271 RNF40O75150 1001 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 BCRP11274 1271 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 ADSSP30520 456 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 COPB2P35606 906 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 TUBB4BP68371 445 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 CFAP221Q4G0U5 840 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 SNRNP48Q6IEG0 339 aaKnown RBP12.81□□□□□ -0.36
RHO-201ENST00000296271 ADAT2Q7Z6V5 191 aaKnown RBP12.81□□□□□ -0.36
RHO-201ENST00000296271 DDX42Q86XP3 938 aaKnown RBP eCLIP12.81□□□□□ -0.36
RHO-201ENST00000296271 CPNE8Q86YQ8 564 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 SLC30A5Q8TAD4 765 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 CCDC127Q96BQ5 260 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 FAM204AQ9H8W3 233 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 EPB41L5Q9HCM4 733 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 UBE2TQ9NPD8 197 aaPredicted RBP12.81□□□□□ -0.36
RHO-201ENST00000296271 STIM2Q9P246 746 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 NR2E1Q9Y466 385 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 CTDP1Q9Y5B0 961 aaPredicted RBP12.81□□□□□ -0.36
RHO-201ENST00000296271 CENPFP49454 3210 aa12.81□□□□□ -0.36
RHO-201ENST00000296271 CEP104O60308 925 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 ZBTB48P10074 688 aaPredicted RBP12.8□□□□□ -0.36
RHO-201ENST00000296271 USP8P40818 1118 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 STAT1P42224 750 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 GUCY2FP51841 1108 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 NAA35Q5VZE5 725 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 AADACL2Q6P093 401 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 METTL13Q8N6R0 699 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 LPAR1Q92633 364 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 HSPBP1Q9NZL4 362 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 SEL1LQ9UBV2 794 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 APEX2Q9UBZ4 518 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 A0A0U1RQG5 324 aaPredicted RBP12.8□□□□□ -0.36
RHO-201ENST00000296271 RAD51CO43502 376 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 HEXIM1O94992 359 aaKnown RBP12.8□□□□□ -0.36
RHO-201ENST00000296271 KIF4AO95239 1232 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 H2AFZP0C0S5 128 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 PLS3P13797 630 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 HNRNPH2P55795 449 aaKnown RBP12.8□□□□□ -0.36
RHO-201ENST00000296271 TAF3Q5VWG9 929 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 FOXR1Q6PIV2 292 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 H2AFVQ71UI9 128 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 MCF2L2Q86YR7 1114 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 ZNF526Q8TF50 670 aaPredicted RBP12.8□□□□□ -0.36
RHO-201ENST00000296271 CCDC43Q96MW1 224 aaKnown RBP12.8□□□□□ -0.36
RHO-201ENST00000296271 STK33Q9BYT3 514 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 THAP2Q9H0W7 228 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 R3HDMLQ9H3Y0 253 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 LARSQ9P2J5 1176 aaKnown RBP12.8□□□□□ -0.36
RHO-201ENST00000296271 COG5Q9UP83 839 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 ADGRA3Q8IWK6 1321 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms