RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 HSPA8P11142 646 aaKnown RBP12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 GRK4P32298 578 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 PRCPP42785 496 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 ZNF200P98182 395 aaPredicted RBP12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 PPP2R3AQ06190 1150 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 EHHADHQ08426 723 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 AFAP1L1Q8TED9 768 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 PPP1R16BQ96T49 567 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 TRPC6Q9Y210 931 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 USP20Q9Y2K6 914 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 PCDHA2Q9Y5H9 948 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 EVPLQ92817 2033 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 MYH11P35749 1972 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 TRIP12Q14669 1992 aaPredicted RBP12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 CCDC66A2RUB6 948 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 H3BRB1 525 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 SEPT4O43236 478 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 MFAP3LO75121 409 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 MYL3P08590 195 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 HSPA1AP0DMV8 641 aaKnown RBP12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 HSPA1BP0DMV9 641 aaKnown RBP12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 HOXD10P28358 340 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 NMT1P30419 496 aaKnown RBP12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 SPAG1Q07617 926 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 TRIM14Q14142 442 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 FSCN1Q16658 493 aaKnown RBP12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 ZC2HC1CQ53FD0 456 aaPredicted RBP12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 XKR3Q5GH77 459 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 CXCL17Q6UXB2 119 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 TOGARAM2Q6ZUX3 1019 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 FIZ1Q96SL8 496 aa12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 TUT1Q9H6E5 874 aaKnown RBP12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 DBR1Q9UK59 544 aaKnown RBP12.62□□□□□ -0.39
CHRNB3-201ENST00000289957 EMSYQ7Z589 1322 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 NKRFO15226 690 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 RHOBTB3O94955 611 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 MYBP10242 640 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 PLA2G4AP47712 749 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 GNG11P61952 73 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 GOLGA8FQ08AF8 430 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 GOLGA8DPQ0D2H9 430 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 TARBP2Q15633 366 aaKnown RBP12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 HERC4Q5GLZ8 1057 aaPredicted RBP12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 GNASQ5JWF2 1037 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 FAM102BQ5T8I3 360 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 UNC13DQ70J99 1090 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 CNGA4Q8IV77 575 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 GOLGA1Q92805 767 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 UNC93B1Q9H1C4 597 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 SAMSN1Q9NSI8 373 aaKnown RBP12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 EXOC1Q9NV70 894 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 PTPN22Q9Y2R2 807 aa12.61□□□□□ -0.39
CHRNB3-201ENST00000289957 ADAMTS4O75173 837 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 PPFIA4O75335 1185 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 HOXD8P13378 290 aaPredicted RBP12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 INSRRP14616 1297 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 HOXD13P35453 343 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 DGKDQ16760 1214 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 FILIP1LQ4L180 1135 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 ATP8B4Q8TF62 1192 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 CCDC43Q96MW1 224 aaKnown RBP12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 WDR24Q96S15 920 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 MAGEF1Q9HAY2 307 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 XPNPEP3Q9NQH7 507 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 PDLIM7Q9NR12 457 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 SETD4Q9NVD3 440 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 LIMA1Q9UHB6 759 aaKnown RBP12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 ADGRA3Q8IWK6 1321 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 FRMD3A2A2Y4 597 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 DUSP11O75319 330 aaKnown RBP12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 CLCN3P51790 818 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 AMPD3Q01432 767 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 KIAA0753Q2KHM9 967 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 MARCH8Q5T0T0 291 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 FAM160B1Q5W0V3 765 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 LHX8Q68G74 356 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 PLPPR4Q7Z2D5 763 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 NELFCDQ8IXH7 590 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 PXYLP1Q8TE99 480 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 SMARCAD1Q9H4L7 1026 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 SUGCTQ9HAC7 445 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 ANKEF1Q9NU02 776 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 CTNND2Q9UQB3 1225 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 ADGRG1Q9Y653 693 aa12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 KIAA0100Q14667 2235 aaKnown RBP12.6□□□□□ -0.39
CHRNB3-201ENST00000289957 TISP43B9A030 160 aa12.59□□□□□ -0.39
CHRNB3-201ENST00000289957 RARBP10826 455 aa12.59□□□□□ -0.39
CHRNB3-201ENST00000289957 MUTP22033 750 aa12.59□□□□□ -0.39
CHRNB3-201ENST00000289957 PURAQ00577 322 aaKnown RBP12.59□□□□□ -0.39
CHRNB3-201ENST00000289957 EMC2Q15006 297 aa12.59□□□□□ -0.39
CHRNB3-201ENST00000289957 BRD3Q15059 726 aa12.59□□□□□ -0.39
CHRNB3-201ENST00000289957 ZNF658Q5TYW1 1059 aaPredicted RBP12.59□□□□□ -0.39
CHRNB3-201ENST00000289957 CC2D1AQ6P1N0 951 aaPredicted RBP12.59□□□□□ -0.39
CHRNB3-201ENST00000289957 PPFIBP1Q86W92 1011 aa12.59□□□□□ -0.39
CHRNB3-201ENST00000289957 MYCT1Q8N699 235 aa12.59□□□□□ -0.39
CHRNB3-201ENST00000289957 ASAP3Q8TDY4 903 aa12.59□□□□□ -0.39
CHRNB3-201ENST00000289957 AP5M1Q9H0R1 490 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms