RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CYP4F22Q6NT55 531 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 ZNF365Q70YC5 407 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 CYFIP1Q7L576 1253 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 FAM198AQ9UFP1 575 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 LRRIQ4A6NIV6 560 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 HSD17B3P37058 310 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 VAMP7P51809 220 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 SF3B2Q13435 895 aaKnown RBP17.17■□□□□ 0.34
SMAD6-201ENST00000288840 EFCAB13Q8IY85 973 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 CACNA2D3Q8IZS8 1091 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 TAS2R14Q9NYV8 317 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 SAMD15Q9P1V8 674 aa17.17■□□□□ 0.34
SMAD6-201ENST00000288840 PHF20L1A8MW92 1017 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 DDX3XO00571 662 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMAD6-201ENST00000288840 FECHP22830 423 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 PDE6CP51160 858 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 GABPAQ06546 454 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 MTM1Q13496 603 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 CBWD6Q4V339 395 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 CBWD3Q5JTY5 395 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 CBWD5Q5RIA9 395 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 SEPT9Q9UHD8 586 aaPredicted RBP17.16■□□□□ 0.34
SMAD6-201ENST00000288840 AGPSO00116 658 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 MTMR1Q13613 665 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 KAT5Q92993 513 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 CNKSR1Q969H4 720 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 ACCSQ96QU6 501 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 KMT5AQ9NQR1 393 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 AGPAT3Q9NRZ7 376 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 BAIAP2L1Q9UHR4 511 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 PPP1R9AQ9ULJ8 1098 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 DGKZQ13574 1117 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 MTERF2Q49AM1 385 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 STRIP1Q5VSL9 837 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 HAUS6Q7Z4H7 955 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 HOOK3Q86VS8 718 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 KIFAP3Q92845 792 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 UNC45AQ9H3U1 944 aa17.16■□□□□ 0.34
SMAD6-201ENST00000288840 USP54Q70EL1 1684 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 CICQ96RK0 1608 aaPredicted RBP17.15■□□□□ 0.34
SMAD6-201ENST00000288840 PPP1R37O75864 691 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 SPATA31C1P0DKV0 1188 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 HDLBPQ00341 1268 aaKnown RBP17.15■□□□□ 0.34
SMAD6-201ENST00000288840 UAP1Q16222 522 aaPredicted RBP17.15■□□□□ 0.34
SMAD6-201ENST00000288840 C10orf76Q5T2E6 689 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 ANKS4BQ8N8V4 417 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 XXYLT1Q8NBI6 393 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 RBM46Q8TBY0 533 aaKnown RBP17.15■□□□□ 0.34
SMAD6-201ENST00000288840 RFFLQ8WZ73 363 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 CCT8L2Q96SF2 557 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 GLIS2Q9BZE0 524 aaPredicted RBP17.15■□□□□ 0.34
SMAD6-201ENST00000288840 KCTD10Q9H3F6 313 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 SYNCQ9H7C4 482 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 PITPNM2Q9BZ72 1349 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 DMP1Q13316 513 aaPredicted RBP17.15■□□□□ 0.34
SMAD6-201ENST00000288840 E2F5Q15329 346 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 HAUS1Q96CS2 278 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 RMDN3Q96TC7 470 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 DNAJC18Q9H819 358 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 APEX2Q9UBZ4 518 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 PNMA2Q9UL42 364 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 ALG6Q9Y672 507 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 SLITRK3O94933 977 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 MAPK4P31152 587 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 NLRP14Q86W24 1093 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 GDAP1Q8TB36 358 aa17.15■□□□□ 0.34
SMAD6-201ENST00000288840 INTS9Q9NV88 658 aaKnown RBP17.15■□□□□ 0.34
SMAD6-201ENST00000288840 BFSP1Q12934 665 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 SGO2Q562F6 1265 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 GKAP1Q5VSY0 366 aaPredicted RBP17.14■□□□□ 0.33
SMAD6-201ENST00000288840 USP37Q86T82 979 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 NIM1KQ8IY84 436 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 NT5C1BQ96P26 610 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 PLCD4Q9BRC7 762 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 FAM213AQ9BRX8 229 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 MYO1FO00160 1098 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 LIG4P49917 911 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 CUL1Q13616 776 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 FAM133BQ5BKY9 247 aaKnown RBP17.14■□□□□ 0.33
SMAD6-201ENST00000288840 ARHGEF26Q96DR7 871 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 IFT74Q96LB3 600 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 PURBQ96QR8 312 aaKnown RBP17.14■□□□□ 0.33
SMAD6-201ENST00000288840 FAM114A2Q9NRY5 505 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 TMEM51Q9NW97 253 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 ANAPC7Q9UJX3 599 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 STK24Q9Y6E0 443 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 C4AP0C0L4 1744 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 C4BP0C0L5 1744 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 DENND3A2RUS2 1198 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 HMGB1P1B2RPK0 211 aaPredicted RBP17.14■□□□□ 0.33
SMAD6-201ENST00000288840 PRLRP16471 622 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 SREBF1P36956 1147 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 DLG4P78352 724 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 GIMAP7Q8NHV1 300 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 ZDHHC15Q96MV8 337 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 STK33Q9BYT3 514 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 AZI2Q9H6S1 392 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 KCNMB3Q9NPA1 279 aa17.14■□□□□ 0.33
SMAD6-201ENST00000288840 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 ZNF233A6NK53 670 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms