RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 TISP43B9A030 160 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 SORBS3O60504 671 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 EXOC3O60645 756 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 TGFB3P10600 412 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 ACTN1P12814 892 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 FMO5P49326 533 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 NEDD9Q14511 834 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 PWP2Q15269 919 aaKnown RBP11.12□□□□□ -0.63
C9orf43-201ENST00000288462 SPA17Q15506 151 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 Q3C1V9 767 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 LRRN4CLQ8ND94 238 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 EHBP1Q8NDI1 1231 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 MPHOSPH6Q99547 160 aaKnown RBP11.12□□□□□ -0.63
C9orf43-201ENST00000288462 PNMA3Q9UL41 463 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 TBX20Q9UMR3 447 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 EXOC7Q9UPT5 735 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 SLC45A1Q9Y2W3 748 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 FHOD1Q9Y613 1164 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 GSTTP1A0A1W2PQM5 241 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 KRT86O43790 486 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 SMTNP53814 917 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 JAM2P57087 298 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 CYP27A1Q02318 531 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 KCTD2Q14681 263 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 SLC9C1Q4G0N8 1177 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 CCDC122Q5T0U0 273 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 METTL7BQ6UX53 244 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 INTS8Q75QN2 995 aaKnown RBP11.12□□□□□ -0.63
C9orf43-201ENST00000288462 TRMT1LQ7Z2T5 733 aaKnown RBP11.12□□□□□ -0.63
C9orf43-201ENST00000288462 AFAP1L1Q8TED9 768 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 SLC10A4Q96EP9 437 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 CEP89Q96ST8 783 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 PCYT2Q99447 389 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 MMP19Q99542 508 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 CBWD1Q9BRT8 395 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 NIFKQ9BYG3 293 aaKnown RBP11.12□□□□□ -0.63
C9orf43-201ENST00000288462 TSGA10Q9BZW7 698 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 LACRTQ9GZZ8 138 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 KMT5AQ9NQR1 393 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 HSPBP1Q9NZL4 362 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 DAAM1Q9Y4D1 1078 aa11.12□□□□□ -0.63
C9orf43-201ENST00000288462 ADGRA3Q8IWK6 1321 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 CTAGE9A4FU28 777 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 CCDC169A6NNP5 214 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 AKR1B10O60218 316 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 PGK2P07205 417 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 SOX10P56693 466 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 FKBP1BP68106 108 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 MYL7Q01449 175 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 TUBB2AQ13885 445 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 RAPGEF1Q13905 1077 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 EMC2Q15006 297 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 ASIC2Q16515 512 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 MTERF2Q49AM1 385 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 MAP1SQ66K74 1059 aaPredicted RBP11.11□□□□□ -0.63
C9orf43-201ENST00000288462 KCNV1Q6PIU1 500 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 XXYLT1Q8NBI6 393 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 NAPGQ99747 312 aaPredicted RBP11.11□□□□□ -0.63
C9orf43-201ENST00000288462 TUBB2BQ9BVA1 445 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 KIFC3Q9BVG8 833 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 IFIH1Q9BYX4 1025 aaKnown RBP11.11□□□□□ -0.63
C9orf43-201ENST00000288462 POLR3FQ9H1D9 316 aaPredicted RBP11.11□□□□□ -0.63
C9orf43-201ENST00000288462 DEF6Q9H4E7 631 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 ARHGAP28Q9P2N2 729 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 AJAP1Q9UKB5 411 aaPredicted RBP11.11□□□□□ -0.63
C9orf43-201ENST00000288462 GUCA1BQ9UMX6 200 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 TFR2Q9UP52 801 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 PCDHA13Q9Y5I0 950 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 DENND3A2RUS2 1198 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 PJA2O43164 708 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 TADA3O75528 432 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 TRIM49P0CI25 452 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 TRIM49CP0CI26 452 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 KRT13P13646 458 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 ABCD1P33897 745 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 NAA30Q147X3 362 aaPredicted RBP11.11□□□□□ -0.63
C9orf43-201ENST00000288462 CBWD6Q4V339 395 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 TDRD12Q587J7 1177 aaKnown RBP11.11□□□□□ -0.63
C9orf43-201ENST00000288462 CBWD3Q5JTY5 395 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 CBWD5Q5RIA9 395 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 MS4A4AQ96JQ5 239 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 DHX33Q9H6R0 707 aaKnown RBP11.11□□□□□ -0.63
C9orf43-201ENST00000288462 CLEC11AQ9Y240 323 aa11.11□□□□□ -0.63
C9orf43-201ENST00000288462 ZNF236Q9UL36 1845 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 H0YCG3 227 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 ARIH2O95376 493 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 GGPS1O95749 300 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 CETPP11597 493 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 SCP2P22307 547 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 PRKCIP41743 596 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 AMPD2Q01433 879 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 KIF5AQ12840 1032 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 TARBP2Q15633 366 aaKnown RBP11.1□□□□□ -0.63
C9orf43-201ENST00000288462 C1orf220Q5T0J3 134 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 FAM160B1Q5W0V3 765 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 IQCEQ6IPM2 695 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 SLC39A4Q6P5W5 647 aa11.1□□□□□ -0.63
C9orf43-201ENST00000288462 CARD6Q9BX69 1037 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms