RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 DEFB115Q30KQ5 88 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 VWA3BQ502W6 1294 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 SCARA3Q6AZY7 606 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 C16orf70Q9BSU1 422 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 DESI2Q9BSY9 194 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 KMT5AQ9NQR1 393 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 KCND2Q9NZV8 630 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 LRRIQ4A6NIV6 560 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 SOWAHDA6NJG2 315 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 CA12O43570 354 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 DGAT1O75907 488 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 YY1P25490 414 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 MSNP26038 577 aaKnown RBP12.86□□□□□ -0.35
SSRP1-201ENST00000278412 WNT7BP56706 349 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 HS1BP3Q53T59 392 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 PRPF31Q8WWY3 499 aaKnown RBP12.86□□□□□ -0.35
SSRP1-201ENST00000278412 TRIB2Q92519 343 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 HAPLN2Q9GZV7 340 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 VTA1Q9NP79 307 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 PDXKO00764 312 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 LGR5O75473 907 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 SRGAP2CP0DJJ0 459 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 NCKAP1LP55160 1127 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 DMP1Q13316 513 aaPredicted RBP12.85□□□□□ -0.35
SSRP1-201ENST00000278412 CAPSQ13938 189 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 FILIP1LQ4L180 1135 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 ZBTB41Q5SVQ8 909 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 TCERG1LQ5VWI1 586 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 TRIM59Q8IWR1 403 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 METTL13Q8N6R0 699 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 AFAP1L1Q8TED9 768 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 DRC1Q96MC2 740 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 GBP3Q9H0R5 595 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 LAMA3Q16787 3333 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 MGAMO43451 1857 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 INSRRP14616 1297 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 FLT3LGP49771 235 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 TNFAIP2Q03169 654 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 SREBF2Q12772 1141 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 GJB7Q6PEY0 223 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 ZC3H3Q8IXZ2 948 aaKnown RBP12.85□□□□□ -0.35
SSRP1-201ENST00000278412 OR6J1Q8NGC5 347 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 PCMTD1Q96MG8 357 aaPredicted RBP12.85□□□□□ -0.35
SSRP1-201ENST00000278412 CTAGE1Q96RT6 745 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 MPHOSPH6Q99547 160 aaKnown RBP12.85□□□□□ -0.35
SSRP1-201ENST00000278412 POP1Q99575 1024 aaKnown RBP12.85□□□□□ -0.35
SSRP1-201ENST00000278412 NIFKQ9BYG3 293 aaKnown RBP12.85□□□□□ -0.35
SSRP1-201ENST00000278412 MAF1Q9H063 256 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 ABHD16BQ9H3Z7 469 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 RNF186Q9NXI6 227 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 AJAP1Q9UKB5 411 aaPredicted RBP12.85□□□□□ -0.35
SSRP1-201ENST00000278412 TBX20Q9UMR3 447 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 TFR2Q9UP52 801 aa12.85□□□□□ -0.35
SSRP1-201ENST00000278412 EIF3DO15371 548 aaKnown RBP eCLIP12.84□□□□□ -0.35
SSRP1-201ENST00000278412 GH1P01241 217 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 ADRB2P07550 413 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 MAPTP10636 758 aaKnown RBP12.84□□□□□ -0.35
SSRP1-201ENST00000278412 LACTBP83111 547 aaPredicted RBP12.84□□□□□ -0.35
SSRP1-201ENST00000278412 SPAG1Q07617 926 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 DUSP28Q4G0W2 176 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 TOGARAM2Q6ZUX3 1019 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 CBWD2Q8IUF1 395 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 BORCS6Q96GS4 357 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 CHP1Q99653 195 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 SIK3Q9Y2K2 1263 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 RBM47A0AV96 593 aaKnown RBP12.84□□□□□ -0.35
SSRP1-201ENST00000278412 CETN3O15182 167 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
SSRP1-201ENST00000278412 MMP3P08254 477 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 PNMA6AP0CW24 399 aaPredicted RBP12.84□□□□□ -0.35
SSRP1-201ENST00000278412 VEGFBP49765 207 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 ZNF200P98182 395 aaPredicted RBP12.84□□□□□ -0.35
SSRP1-201ENST00000278412 GTF2BQ00403 316 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 TMEM62Q0P6H9 643 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 MAN2A1Q16706 1144 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 EDRF1Q3B7T1 1238 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 FAM160B1Q5W0V3 765 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 ZNF467Q7Z7K2 595 aaPredicted RBP12.84□□□□□ -0.35
SSRP1-201ENST00000278412 KCTD17Q8N5Z5 321 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 ATP8B4Q8TF62 1192 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 SLC7A3Q8WY07 619 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 MINDY3Q9H8M7 445 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 TOPORSQ9NS56 1045 aaPredicted RBP12.84□□□□□ -0.35
SSRP1-201ENST00000278412 IMPACTQ9P2X3 320 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 MFAP3LO75121 409 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 ABL1P00519 1130 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 PLEKP08567 350 aaPredicted RBP12.84□□□□□ -0.35
SSRP1-201ENST00000278412 IQCF3P0C7M6 154 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 SLC9A1P19634 815 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 ARL2P36404 184 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 KCNH2Q12809 1159 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 ANKRD20A12PQ8NF67 263 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 SEL1LQ9UBV2 794 aa12.84□□□□□ -0.35
SSRP1-201ENST00000278412 GNEQ9Y223 722 aaKnown RBP12.84□□□□□ -0.35
SSRP1-201ENST00000278412 KAT6AQ92794 2004 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 B4GALT5O43286 388 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 VTNP04004 478 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 TPM3P06753 285 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 HARSP12081 509 aaKnown RBP12.83□□□□□ -0.36
SSRP1-201ENST00000278412 CBWD6Q4V339 395 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms