RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CCDC105Q8IYK2 499 aa13.96□□□□□ -0.17
COL8A1-202ENST00000273342 LBHD1Q9BQE6 289 aaPredicted RBP13.96□□□□□ -0.17
COL8A1-202ENST00000273342 TRPC6Q9Y210 931 aa13.96□□□□□ -0.17
COL8A1-202ENST00000273342 CES2O00748 559 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 KIAA0391O15091 583 aaKnown RBP13.96□□□□□ -0.18
COL8A1-202ENST00000273342 KRT16P08779 473 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 NMT1P30419 496 aaKnown RBP13.96□□□□□ -0.18
COL8A1-202ENST00000273342 LRCH2Q5VUJ6 765 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 TRIM68Q6AZZ1 485 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 TTC27Q6P3X3 843 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 C16orf86Q6ZW13 317 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 SLFN11Q7Z7L1 901 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 ERICH1Q86X53 443 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 ELMO3Q96BJ8 720 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 PAIP2Q9BPZ3 127 aaKnown RBP13.96□□□□□ -0.18
COL8A1-202ENST00000273342 ACP6Q9NPH0 428 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 USP40Q9NVE5 1235 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 RGL1Q9NZL6 768 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 SLC12A4Q9UP95 1085 aa13.96□□□□□ -0.18
COL8A1-202ENST00000273342 ITGB4P16144 1822 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 TNFAIP3P21580 790 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 CRYMQ14894 314 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 PIGWQ7Z7B1 504 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 AMIGO3Q86WK7 504 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 ZDHHC14Q8IZN3 488 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 EIF1ADQ8N9N8 165 aaKnown RBP13.95□□□□□ -0.18
COL8A1-202ENST00000273342 WDR66Q8TBY9 1149 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 SLC20A1Q8WUM9 679 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 PWWP2AQ96N64 755 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 RUSC1Q9BVN2 902 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 RTFDC1Q9BY42 306 aaPredicted RBP13.95□□□□□ -0.18
COL8A1-202ENST00000273342 ANKRD2Q9GZV1 360 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 ENO4A6NNW6 628 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 CHMP2AO43633 222 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 CLSTN1O94985 981 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 GHRP10912 638 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 MARSP56192 900 aaKnown RBP13.95□□□□□ -0.18
COL8A1-202ENST00000273342 RNASELQ05823 741 aaKnown RBP13.95□□□□□ -0.18
COL8A1-202ENST00000273342 MAPK7Q13164 816 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 C8orf37Q96NL8 207 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 ADAM33Q9BZ11 813 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 ALG6Q9Y672 507 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 SNED1Q8TER0 1413 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 NHSL1Q5SYE7 1610 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 DLEC1Q9Y238 1755 aa13.95□□□□□ -0.18
COL8A1-202ENST00000273342 FAM196BA6NMK8 535 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 BTNL10A8MVZ5 291 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 SLC12A3P55017 1021 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 NCALDP61601 193 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 SHROOM1Q2M3G4 852 aaPredicted RBP13.94□□□□□ -0.18
COL8A1-202ENST00000273342 USH1GQ495M9 461 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 TBC1D10BQ4KMP7 808 aaPredicted RBP13.94□□□□□ -0.18
COL8A1-202ENST00000273342 FRMD5Q7Z6J6 570 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 RFFLQ8WZ73 363 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 TXLNGYQ9BZA5 131 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 ARHGEF10LQ9HCE6 1279 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 MTMR4Q9NYA4 1195 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 C15orf41Q9Y2V0 281 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 RARAP10276 462 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 NQO1P15559 274 aaKnown RBP13.94□□□□□ -0.18
COL8A1-202ENST00000273342 EDRF1Q3B7T1 1238 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 CBWD6Q4V339 395 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 CBWD3Q5JTY5 395 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 CBWD5Q5RIA9 395 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 CCDC137Q6PK04 289 aaKnown RBP13.94□□□□□ -0.18
COL8A1-202ENST00000273342 ARHGAP27Q6ZUM4 889 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 FAM47EQ6ZV65 393 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 CYP2W1Q8TAV3 490 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 ZNF570Q96NI8 536 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 KIF9Q9HAQ2 790 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 GRHL1Q9NZI5 618 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 DNM3Q9UQ16 869 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 CCDC88AQ3V6T2 1871 aa13.94□□□□□ -0.18
COL8A1-202ENST00000273342 ESYT2A0FGR8 921 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 TMEM120BA0PK00 339 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 CLGNO14967 610 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 AUHQ13825 339 aaKnown RBP13.93□□□□□ -0.18
COL8A1-202ENST00000273342 CNGA2Q16280 664 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 EXOC3L1Q86VI1 746 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 PRELID2Q8N945 189 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 MXD3Q9BW11 206 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 ASTN1O14525 1302 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 KDM3AQ9Y4C1 1321 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 PNMA6FA0A0J9YX94 578 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 BHMG1C9JSJ3 638 aaPredicted RBP13.93□□□□□ -0.18
COL8A1-202ENST00000273342 ASAP2O43150 1006 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 CALUO43852 315 aaPredicted RBP13.93□□□□□ -0.18
COL8A1-202ENST00000273342 SNX3O60493 162 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 SOX5P35711 763 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 PRKCIP41743 596 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 NSMFQ6X4W1 530 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 BZW1Q7L1Q6 419 aaKnown RBP13.93□□□□□ -0.18
COL8A1-202ENST00000273342 PHLDB2Q86SQ0 1253 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 FAM186BQ8IYM0 893 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 SEC14L1Q92503 715 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 ARHGEF2Q92974 986 aaKnown RBP13.93□□□□□ -0.18
COL8A1-202ENST00000273342 FAM118BQ9BPY3 351 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 RIMBP2O15034 1052 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 TBCAO75347 108 aaKnown RBP13.93□□□□□ -0.18
COL8A1-202ENST00000273342 FERP16591 822 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms