RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 CCDC150Q8NCX0 1101 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 TRAPPC12Q8WVT3 735 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 USP6NLQ92738 828 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 KIFAP3Q92845 792 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 ZBTB10Q96DT7 871 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 CAPNS2Q96L46 248 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 DHX33Q9H6R0 707 aaKnown RBP13.73□□□□□ -0.21
CAPN9-201ENST00000271971 AGPAT3Q9NRZ7 376 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 AKAP3O75969 853 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 TUBB4AP04350 444 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 GYPCP04921 128 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 SLC20A2Q08357 652 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 RBL2Q08999 1139 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 DRP2Q13474 957 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 LAMC2Q13753 1193 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 PLCB4Q15147 1175 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 TARBP2Q15633 366 aaKnown RBP13.73□□□□□ -0.21
CAPN9-201ENST00000271971 PTPN14Q15678 1187 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 MAN2A1Q16706 1144 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 VWA3BQ502W6 1294 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 CCDC155Q8N6L0 562 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 TMEM161BQ8NDZ6 487 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 ASAP3Q8TDY4 903 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 SLC7A3Q8WY07 619 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 GBP3Q9H0R5 595 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 KMT5AQ9NQR1 393 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 NRBP2Q9NSY0 501 aa13.73□□□□□ -0.21
CAPN9-201ENST00000271971 SIP14410 1827 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 ZBTB42B2RXF5 422 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 LGALS2P05162 132 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 MAPTP10636 758 aaKnown RBP13.72□□□□□ -0.21
CAPN9-201ENST00000271971 CYP2J2P51589 502 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 NOGQ13253 232 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 TC2NQ8N9U0 490 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 ATP8B4Q8TF62 1192 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 NDST4Q9H3R1 872 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 GJD2Q9UKL4 321 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 TRPC6Q9Y210 931 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 ITIH6Q6UXX5 1313 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 KAT6AQ92794 2004 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 DENND3A2RUS2 1198 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 RNF225M0QZC1 329 aaPredicted RBP13.72□□□□□ -0.21
CAPN9-201ENST00000271971 HOXC6P09630 235 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 SKILP12757 684 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 CASP14P31944 242 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 DNM2P50570 870 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 FXR1P51114 621 aaKnown RBP eCLIP13.72□□□□□ -0.21
CAPN9-201ENST00000271971 GTF2BQ00403 316 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 TBC1D8BQ0IIM8 1120 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 DUSP28Q4G0W2 176 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 HS2ST1Q7LGA3 356 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 PLPPR4Q7Z2D5 763 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 PPTC7Q8NI37 304 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 FAM167AQ96KS9 214 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 RNPEPQ9H4A4 650 aa13.72□□□□□ -0.21
CAPN9-201ENST00000271971 SLU7O95391 586 aaKnown RBP13.71□□□□□ -0.21
CAPN9-201ENST00000271971 RGS2P41220 211 aa13.71□□□□□ -0.21
CAPN9-201ENST00000271971 SMTNP53814 917 aa13.71□□□□□ -0.21
CAPN9-201ENST00000271971 CAP1Q01518 475 aa13.71□□□□□ -0.21
CAPN9-201ENST00000271971 DEFB115Q30KQ5 88 aa13.71□□□□□ -0.21
CAPN9-201ENST00000271971 TRIM59Q8IWR1 403 aa13.71□□□□□ -0.21
CAPN9-201ENST00000271971 LRRC71Q8N4P6 559 aa13.71□□□□□ -0.21
CAPN9-201ENST00000271971 ZNF784Q8NCA9 323 aaPredicted RBP13.71□□□□□ -0.21
CAPN9-201ENST00000271971 OR6J1Q8NGC5 347 aa13.71□□□□□ -0.21
CAPN9-201ENST00000271971 ACCSQ96QU6 501 aa13.71□□□□□ -0.21
CAPN9-201ENST00000271971 APBA2Q99767 749 aa13.71□□□□□ -0.21
CAPN9-201ENST00000271971 SMARCAD1Q9H4L7 1026 aa13.71□□□□□ -0.21
CAPN9-201ENST00000271971 CALCOCO1Q9P1Z2 691 aa13.71□□□□□ -0.21
CAPN9-201ENST00000271971 ZNF215Q9UL58 517 aaPredicted RBP13.71□□□□□ -0.21
CAPN9-201ENST00000271971 GNA14O95837 355 aa13.71□□□□□ -0.22
CAPN9-201ENST00000271971 GLRA2P23416 452 aa13.71□□□□□ -0.22
CAPN9-201ENST00000271971 OLFML2BQ68BL8 750 aa13.71□□□□□ -0.22
CAPN9-201ENST00000271971 PPFIBP1Q86W92 1011 aa13.71□□□□□ -0.22
CAPN9-201ENST00000271971 ZSWIM2Q8NEG5 633 aa13.71□□□□□ -0.22
CAPN9-201ENST00000271971 SOCS4Q8WXH5 440 aa13.71□□□□□ -0.22
CAPN9-201ENST00000271971 EMID1Q96A84 441 aaPredicted RBP13.71□□□□□ -0.22
CAPN9-201ENST00000271971 CBWD1Q9BRT8 395 aa13.71□□□□□ -0.22
CAPN9-201ENST00000271971 ST6GALNAC4Q9H4F1 302 aa13.71□□□□□ -0.22
CAPN9-201ENST00000271971 PCIF1Q9H4Z3 704 aa13.71□□□□□ -0.22
CAPN9-201ENST00000271971 TBX20Q9UMR3 447 aa13.71□□□□□ -0.22
CAPN9-201ENST00000271971 RASSF10A6NK89 507 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 TBC1D8O95759 1140 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 ZNF865P0CJ78 1059 aaPredicted RBP13.7□□□□□ -0.22
CAPN9-201ENST00000271971 RPL13P26373 211 aaKnown RBP13.7□□□□□ -0.22
CAPN9-201ENST00000271971 RFC5P40937 340 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 PSMC4P43686 418 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 KCNJ6P48051 423 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 MARSP56192 900 aaKnown RBP13.7□□□□□ -0.22
CAPN9-201ENST00000271971 IGBP1P78318 339 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 HTRA3P83110 453 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 TNFAIP2Q03169 654 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 ALCAMQ13740 583 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 DCAF17Q5H9S7 520 aaPredicted RBP13.7□□□□□ -0.22
CAPN9-201ENST00000271971 FKBP15Q5T1M5 1219 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 MSL3Q8N5Y2 521 aaKnown RBP13.7□□□□□ -0.22
CAPN9-201ENST00000271971 SPIRE2Q8WWL2 714 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 IFT74Q96LB3 600 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 PCMTD1Q96MG8 357 aaPredicted RBP13.7□□□□□ -0.22
CAPN9-201ENST00000271971 SUGCTQ9HAC7 445 aa13.7□□□□□ -0.22
CAPN9-201ENST00000271971 ERAP1Q9NZ08 941 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms