RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 AZI2Q9H6S1 392 aa22.53■■□□□ 1.2
LYSMD2-201ENST00000267838 KMT5AQ9NQR1 393 aa22.53■■□□□ 1.2
LYSMD2-201ENST00000267838 FAM207AQ9NSI2 230 aaPredicted RBP22.53■■□□□ 1.2
LYSMD2-201ENST00000267838 DIS3Q9Y2L1 958 aaKnown RBP22.53■■□□□ 1.2
LYSMD2-201ENST00000267838 PPP2R2CQ9Y2T4 447 aa22.53■■□□□ 1.2
LYSMD2-201ENST00000267838 ZSCAN20P17040 1043 aaPredicted RBP22.52■■□□□ 1.2
LYSMD2-201ENST00000267838 MAPK4P31152 587 aa22.52■■□□□ 1.2
LYSMD2-201ENST00000267838 CYP2J2P51589 502 aa22.52■■□□□ 1.2
LYSMD2-201ENST00000267838 GRB14Q14449 540 aa22.52■■□□□ 1.2
LYSMD2-201ENST00000267838 HSDL1Q3SXM5 330 aa22.52■■□□□ 1.2
LYSMD2-201ENST00000267838 RGMBQ6NW40 437 aa22.52■■□□□ 1.2
LYSMD2-201ENST00000267838 PLEKHH3Q7Z736 793 aa22.52■■□□□ 1.2
LYSMD2-201ENST00000267838 SAPCD2Q86UD0 394 aa22.52■■□□□ 1.2
LYSMD2-201ENST00000267838 NEK11Q8NG66 645 aa22.52■■□□□ 1.2
LYSMD2-201ENST00000267838 BORCS6Q96GS4 357 aa22.52■■□□□ 1.2
LYSMD2-201ENST00000267838 POLR3FQ9H1D9 316 aaPredicted RBP22.52■■□□□ 1.2
LYSMD2-201ENST00000267838 FRMD4BQ9Y2L6 1034 aa22.52■■□□□ 1.2
LYSMD2-201ENST00000267838 LGR5O75473 907 aa22.51■■□□□ 1.19
LYSMD2-201ENST00000267838 AFPP02771 609 aaKnown RBP22.51■■□□□ 1.19
LYSMD2-201ENST00000267838 DPP9Q86TI2 863 aa22.51■■□□□ 1.19
LYSMD2-201ENST00000267838 COPS5Q92905 334 aa22.51■■□□□ 1.19
LYSMD2-201ENST00000267838 SPATA33Q96N06 139 aa22.51■■□□□ 1.19
LYSMD2-201ENST00000267838 CEP89Q96ST8 783 aa22.51■■□□□ 1.19
LYSMD2-201ENST00000267838 DHX33Q9H6R0 707 aaKnown RBP22.51■■□□□ 1.19
LYSMD2-201ENST00000267838 VTA1Q9NP79 307 aa22.51■■□□□ 1.19
LYSMD2-201ENST00000267838 EXOC7Q9UPT5 735 aa22.51■■□□□ 1.19
LYSMD2-201ENST00000267838 SPDYE4A6NLX3 237 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 IGF2BP3O00425 579 aaKnown RBP eCLIP22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 EPHB6O15197 1021 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 SNRPFP62306 86 aaKnown RBP22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 DCAF17Q5H9S7 520 aaPredicted RBP22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 REXO1L1PQ8IX06 675 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 C12orf56Q8IXR9 622 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 TMEM174Q8WUU8 243 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 FAM167AQ96KS9 214 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 IFT74Q96LB3 600 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 KIFC3Q9BVG8 833 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 ZCCHC17Q9NP64 241 aaKnown RBP22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 TBX20Q9UMR3 447 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 ADGRA2Q96PE1 1338 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 GOLGA6L9A6NEM1 432 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 RFC5P40937 340 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 ETF1P62495 437 aaKnown RBP22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 TARBP2Q15633 366 aaKnown RBP22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 TMEM63BQ5T3F8 832 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 TCERG1LQ5VWI1 586 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 TAPT1Q6NXT6 567 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 SYT10Q6XYQ8 523 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 GLG1Q92896 1179 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 SLC35C1Q96A29 364 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 DESI2Q9BSY9 194 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 EDEM3Q9BZQ6 932 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 CPA4Q9UI42 421 aa22.5■■□□□ 1.19
LYSMD2-201ENST00000267838 PASKQ96RG2 1323 aa22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 DENND3A2RUS2 1198 aa22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 EXOC3O60645 756 aa22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 MEA1Q16626 185 aa22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 WDR59Q6PJI9 974 aa22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 MAMDC4Q6UXC1 1216 aa22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 PLPPR4Q7Z2D5 763 aa22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 MAP4K3Q8IVH8 894 aa22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 SLC7A3Q8WY07 619 aa22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 CHP1Q99653 195 aa22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 LSM14BQ9BX40 385 aaKnown RBP22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 PRDM10Q9NQV6 1147 aa22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 ZNHIT6Q9NWK9 470 aaKnown RBP22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 KCNG1Q9UIX4 513 aa22.49■■□□□ 1.19
LYSMD2-201ENST00000267838 EMSYQ7Z589 1322 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 TISP43B9A030 160 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 CCDC175P0C221 793 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 NAA30Q147X3 362 aaPredicted RBP22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 BBXQ8WY36 941 aaPredicted RBP22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 CRACR2AQ9BSW2 395 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 PRDM4Q9UKN5 801 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 PPME1Q9Y570 386 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 ADGRG1Q9Y653 693 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 ZNF236Q9UL36 1845 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 ADGRA3Q8IWK6 1321 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 RBM47A0AV96 593 aaKnown RBP22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 SLC15A5A6NIM6 579 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 SLC10A3P09131 477 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 TAF1CQ15572 869 aaPredicted RBP22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 TMEM143Q96AN5 459 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 MAML3Q96JK9 1138 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 CBWD1Q9BRT8 395 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 KATNBL1Q9H079 304 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 PCIF1Q9H4Z3 704 aa22.48■■□□□ 1.19
LYSMD2-201ENST00000267838 H0YCG3 227 aa22.47■■□□□ 1.19
LYSMD2-201ENST00000267838 NOL4O94818 638 aa22.47■■□□□ 1.19
LYSMD2-201ENST00000267838 SNAI1O95863 264 aaPredicted RBP22.47■■□□□ 1.19
LYSMD2-201ENST00000267838 GABPB1Q06547 395 aaPredicted RBP22.47■■□□□ 1.19
LYSMD2-201ENST00000267838 ARHGAP1Q07960 439 aa22.47■■□□□ 1.19
LYSMD2-201ENST00000267838 ELF2Q15723 593 aa22.47■■□□□ 1.19
LYSMD2-201ENST00000267838 TRIM50Q86XT4 487 aa22.47■■□□□ 1.19
LYSMD2-201ENST00000267838 CEP72Q9P209 647 aa22.47■■□□□ 1.19
LYSMD2-201ENST00000267838 MARK3P27448 753 aa22.46■■□□□ 1.19
LYSMD2-201ENST00000267838 ABCD1P33897 745 aa22.46■■□□□ 1.19
LYSMD2-201ENST00000267838 ARL2P36404 184 aa22.46■■□□□ 1.19
LYSMD2-201ENST00000267838 LAMC2Q13753 1193 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms