RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 RPS6KA1Q15418 735 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 CPXCR1Q8N123 301 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 DAW1Q8N136 415 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 LNX1Q8TBB1 728 aaPredicted RBP14.05□□□□□ -0.16
CPSF6-201ENST00000266679 AFAP1L1Q8TED9 768 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 INTS2Q9H0H0 1204 aaKnown RBP14.05□□□□□ -0.16
CPSF6-201ENST00000266679 HOMER2Q9NSB8 354 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 DMAC2Q9NW81 257 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 KCND2Q9NZV8 630 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 NENFQ9UMX5 172 aa14.05□□□□□ -0.16
CPSF6-201ENST00000266679 RPTORQ8N122 1335 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 THSD7BQ9C0I4 1608 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 ZSCAN5CA6NGD5 496 aaPredicted RBP14.04□□□□□ -0.16
CPSF6-201ENST00000266679 F8VZ95 297 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 EVI5O60447 810 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 HEXIM1O94992 359 aaKnown RBP14.04□□□□□ -0.16
CPSF6-201ENST00000266679 KIF4AO95239 1232 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 H2AFZP0C0S5 128 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 ALAS1P13196 640 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 CAPN2P17655 700 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 SOX5P35711 763 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 IFI16Q16666 785 aaKnown RBP14.04□□□□□ -0.16
CPSF6-201ENST00000266679 PADI6Q6TGC4 694 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 H2AFVQ71UI9 128 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 GOLGA6L1Q8N7Z2 621 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 RDH13Q8NBN7 331 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 TSEN2Q8NCE0 465 aaKnown RBP14.04□□□□□ -0.16
CPSF6-201ENST00000266679 NEK9Q8TD19 979 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 CLEC4DQ8WXI8 215 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 RIT2Q99578 217 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 KCNH7Q9NS40 1196 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 PGAP2Q9UHJ9 254 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 DNAJC12Q9UKB3 198 aa14.04□□□□□ -0.16
CPSF6-201ENST00000266679 ESYT3A0FGR9 886 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 EXOC3O60645 756 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 GLI1P08151 1106 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 ANXA13P27216 316 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 TNFRSF8P28908 595 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 GUCY2DQ02846 1103 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 DRAP1Q14919 205 aaPredicted RBP14.03□□□□□ -0.16
CPSF6-201ENST00000266679 GLE1Q53GS7 698 aaKnown RBP14.03□□□□□ -0.16
CPSF6-201ENST00000266679 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.03□□□□□ -0.16
CPSF6-201ENST00000266679 LRRC57Q8N9N7 239 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 MTMR14Q8NCE2 650 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 AGBL3Q8NEM8 1001 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 TPCN2Q8NHX9 752 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 RAVER2Q9HCJ3 691 aaKnown RBP14.03□□□□□ -0.16
CPSF6-201ENST00000266679 SAMM50Q9Y512 469 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 TMCO5BA8MYB1 307 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 WNT10BO00744 389 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 RPS12P25398 132 aaKnown RBP14.03□□□□□ -0.16
CPSF6-201ENST00000266679 ITGB3BPQ13352 177 aaPredicted RBP14.03□□□□□ -0.16
CPSF6-201ENST00000266679 ZSCAN26Q16670 478 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 TKFCQ3LXA3 575 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 MUM1L1Q5H9M0 696 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 TAF3Q5VWG9 929 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 KLHL7Q8IXQ5 586 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 PCIF1Q9H4Z3 704 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 AGO4Q9HCK5 861 aaKnown RBP14.03□□□□□ -0.16
CPSF6-201ENST00000266679 EPB41L5Q9HCM4 733 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 GGA3Q9NZ52 723 aa14.03□□□□□ -0.16
CPSF6-201ENST00000266679 TISP43B9A030 160 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 AOC2O75106 756 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 PPP1R37O75864 691 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 CARSP49589 748 aaKnown RBP14.02□□□□□ -0.16
CPSF6-201ENST00000266679 BFSP1Q12934 665 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 ARHGAP44Q17R89 818 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 EMBQ6PCB8 327 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 LEKR1Q6ZMV7 388 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 IFT20Q8IY31 132 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 USP38Q8NB14 1042 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 OLIG1Q8TAK6 271 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 GOLGA5Q8TBA6 731 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 IFT81Q8WYA0 676 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 CAPNS2Q96L46 248 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 SH2D3AQ9BRG2 576 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 STK33Q9BYT3 514 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 DEFB129Q9H1M3 183 aa14.02□□□□□ -0.16
CPSF6-201ENST00000266679 ATP8B3O60423 1300 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 WDR46O15213 610 aaKnown RBP14.02□□□□□ -0.17
CPSF6-201ENST00000266679 CEP104O60308 925 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 P4HBP07237 508 aaKnown RBP14.02□□□□□ -0.17
CPSF6-201ENST00000266679 BCRP11274 1271 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 EIF2AK2P19525 551 aaKnown RBP14.02□□□□□ -0.17
CPSF6-201ENST00000266679 ACTN2P35609 894 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 RASA3Q14644 834 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 PPP2R5AQ15172 486 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 GLYCTKQ8IVS8 523 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 PRPF38AQ8NAV1 312 aaKnown RBP14.02□□□□□ -0.17
CPSF6-201ENST00000266679 ZC3H15Q8WU90 426 aaKnown RBP14.02□□□□□ -0.17
CPSF6-201ENST00000266679 CAVIN3Q969G5 261 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 ZBED3Q96IU2 234 aaPredicted RBP14.02□□□□□ -0.17
CPSF6-201ENST00000266679 STRA6Q9BX79 667 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 GPR88Q9GZN0 384 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 MYOZ2Q9NPC6 264 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 GDF3Q9NR23 364 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 NFU1Q9UMS0 254 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 TLL2Q9Y6L7 1015 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 ZHX2Q9Y6X8 837 aa14.02□□□□□ -0.17
CPSF6-201ENST00000266679 TMEM150BA6NC51 233 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms