RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 RFFLQ8WZ73 363 aa18.37■□□□□ 0.53
SRF-201ENST00000265354 REEP2Q9BRK0 252 aa18.37■□□□□ 0.53
SRF-201ENST00000265354 KLRC4O43908 158 aa18.37■□□□□ 0.53
SRF-201ENST00000265354 C4orf33Q8N1A6 199 aa18.37■□□□□ 0.53
SRF-201ENST00000265354 TPCN2Q8NHX9 752 aa18.37■□□□□ 0.53
SRF-201ENST00000265354 POMGNT1Q8WZA1 660 aa18.37■□□□□ 0.53
SRF-201ENST00000265354 ERP44Q9BS26 406 aa18.37■□□□□ 0.53
SRF-201ENST00000265354 KLHL11Q9NVR0 708 aa18.37■□□□□ 0.53
SRF-201ENST00000265354 RPS6KA5O75582 802 aa18.37■□□□□ 0.53
SRF-201ENST00000265354 ATP2A2P16615 1042 aaKnown RBP18.37■□□□□ 0.53
SRF-201ENST00000265354 RWDD2BP57060 319 aa18.37■□□□□ 0.53
SRF-201ENST00000265354 ZNF394Q53GI3 561 aa18.37■□□□□ 0.53
SRF-201ENST00000265354 BRINP3Q76B58 766 aa18.37■□□□□ 0.53
SRF-201ENST00000265354 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.37■□□□□ 0.53
SRF-201ENST00000265354 TESPA1A2RU30 521 aaPredicted RBP18.36■□□□□ 0.53
SRF-201ENST00000265354 RASA1P20936 1047 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 BFSP1Q12934 665 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 MIIPQ5JXC2 388 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 GPATCH4Q5T3I0 446 aaKnown RBP18.36■□□□□ 0.53
SRF-201ENST00000265354 AADACL2Q6P093 401 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 RNF207Q6ZRF8 634 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 SUGP1Q8IWZ8 645 aaKnown RBP18.36■□□□□ 0.53
SRF-201ENST00000265354 RNF217Q8TC41 542 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 LRRC37BQ96QE4 947 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 NUDCD1Q96RS6 583 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 THAP2Q9H0W7 228 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 UBOX5O94941 541 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 PRLRP16471 622 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 QRICH1Q2TAL8 776 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 CASC4Q6P4E1 433 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 EPM2AIP1Q7L775 607 aaPredicted RBP18.36■□□□□ 0.53
SRF-201ENST00000265354 CAVIN3Q969G5 261 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 IL17RBQ9NRM6 502 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 CNOT8Q9UFF9 292 aaKnown RBP18.36■□□□□ 0.53
SRF-201ENST00000265354 GCFC2P16383 781 aaKnown RBP18.36■□□□□ 0.53
SRF-201ENST00000265354 FLT3P36888 993 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 QPCTQ16769 361 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 PRCCQ92733 491 aaPredicted RBP18.36■□□□□ 0.53
SRF-201ENST00000265354 PREX1Q8TCU6 1659 aa18.36■□□□□ 0.53
SRF-201ENST00000265354 PODXLO00592 558 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 TMCO4Q5TGY1 634 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 LRP10Q7Z4F1 713 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 KLF6Q99612 283 aaPredicted RBP18.35■□□□□ 0.53
SRF-201ENST00000265354 GLT8D2Q9H1C3 349 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 CFAP69A5D8W1 941 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 DCDC2CA8MYV0 355 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 BBS9Q3SYG4 887 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 MEI1Q5TIA1 1274 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 CCDC110Q8TBZ0 833 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 EDEM3Q9BZQ6 932 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 NKRFO15226 690 aaKnown RBP eCLIP18.35■□□□□ 0.534e-9■■■■■ 30.3
SRF-201ENST00000265354 GPC5P78333 572 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 STRN3Q13033 797 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 CLUL1Q15846 466 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 SPATA21Q7Z572 469 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 ERP27Q96DN0 273 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 ZNF577Q9BSK1 485 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 NUP85Q9BW27 656 aa18.35■□□□□ 0.53
SRF-201ENST00000265354 MAK16Q9BXY0 300 aaKnown RBP18.35■□□□□ 0.53
SRF-201ENST00000265354 CYP26A1O43174 497 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 TAL1P17542 331 aaPredicted RBP18.34■□□□□ 0.53
SRF-201ENST00000265354 RFC1P35251 1148 aaPredicted RBP18.34■□□□□ 0.53
SRF-201ENST00000265354 YWHAGP61981 247 aaKnown RBP eCLIP18.34■□□□□ 0.53
SRF-201ENST00000265354 ATG4AQ8WYN0 398 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 USP15Q9Y4E8 981 aaPredicted RBP18.34■□□□□ 0.53
SRF-201ENST00000265354 ZBTB5O15062 677 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 UPP2O95045 317 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 SOX5P35711 763 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 SDCCAG8Q86SQ7 713 aaPredicted RBP18.34■□□□□ 0.53
SRF-201ENST00000265354 DYDC2Q96IM9 177 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 TYW1Q9NV66 732 aaKnown RBP18.34■□□□□ 0.53
SRF-201ENST00000265354 MYO5BQ9ULV0 1848 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 DIP2AQ14689 1571 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 DNAJC3Q13217 504 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 RSAD2Q8WXG1 361 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 TEKT1Q969V4 418 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 DBNDD1Q9H9R9 158 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 JCADQ9P266 1359 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 PI4K2BG5E9Z4 385 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 HNRNPDLO14979 420 aaKnown RBP18.34■□□□□ 0.53
SRF-201ENST00000265354 ALAS1P13196 640 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 NFIXQ14938 502 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 ANKRD20A8PQ5CZ79 823 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 C3orf67Q6ZVT6 689 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 VGLL2Q8N8G2 317 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 NEDD1Q8NHV4 660 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 SPIRE2Q8WWL2 714 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 TTC17Q96AE7 1141 aa18.34■□□□□ 0.53
SRF-201ENST00000265354 PLS3P13797 630 aa18.33■□□□□ 0.53
SRF-201ENST00000265354 CNGA1P29973 690 aa18.33■□□□□ 0.53
SRF-201ENST00000265354 PEX3P56589 373 aa18.33■□□□□ 0.53
SRF-201ENST00000265354 KRT17Q04695 432 aa18.33■□□□□ 0.53
SRF-201ENST00000265354 ZNF564Q8TBZ8 553 aaPredicted RBP18.33■□□□□ 0.53
SRF-201ENST00000265354 NT5C1BQ96P26 610 aa18.33■□□□□ 0.53
SRF-201ENST00000265354 EMSYQ7Z589 1322 aa18.33■□□□□ 0.53
SRF-201ENST00000265354 COMTP21964 271 aa18.33■□□□□ 0.52
SRF-201ENST00000265354 FIGNQ5HY92 759 aa18.33■□□□□ 0.52
SRF-201ENST00000265354 LMBRD2Q68DH5 695 aaPredicted RBP18.33■□□□□ 0.52
SRF-201ENST00000265354 RHOT2Q8IXI1 618 aa18.33■□□□□ 0.52
SRF-201ENST00000265354 RAB20Q9NX57 234 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms