RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 CPNE8Q86YQ8 564 aa13.41□□□□□ -0.26
CHMP3-201ENST00000263856 JAMLQ86YT9 394 aa13.41□□□□□ -0.26
CHMP3-201ENST00000263856 CERS5Q8N5B7 392 aa13.41□□□□□ -0.26
CHMP3-201ENST00000263856 ALG3Q92685 438 aa13.41□□□□□ -0.26
CHMP3-201ENST00000263856 CHMP6Q96FZ7 201 aa13.41□□□□□ -0.26
CHMP3-201ENST00000263856 RBM17Q96I25 401 aaKnown RBP13.41□□□□□ -0.26
CHMP3-201ENST00000263856 XPO6Q96QU8 1125 aaKnown RBP13.41□□□□□ -0.26
CHMP3-201ENST00000263856 SEMA4AQ9H3S1 761 aa13.41□□□□□ -0.26
CHMP3-201ENST00000263856 UBE2TQ9NPD8 197 aaPredicted RBP13.41□□□□□ -0.26
CHMP3-201ENST00000263856 INTS9Q9NV88 658 aaKnown RBP13.41□□□□□ -0.26
CHMP3-201ENST00000263856 PITPNM2Q9BZ72 1349 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 SMTNP53814 917 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 ICA1Q05084 483 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 GABPAQ06546 454 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 TRIP13Q15645 432 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-201ENST00000263856 ZKSCAN8Q15776 578 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-201ENST00000263856 CDC42EP5Q6NZY7 148 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 ARHGAP27Q6ZUM4 889 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 BANK1Q8NDB2 785 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 N4BP2L2Q92802 583 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-201ENST00000263856 DBNDD1Q9H9R9 158 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 ACSL3O95573 720 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 IL1R1P14778 569 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 LMNB1P20700 586 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 HYIQ5T013 277 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 CCDC197Q8NCU1 140 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 HES6Q96HZ4 224 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 AMNQ9BXJ7 453 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 INTS2Q9H0H0 1204 aaKnown RBP13.4□□□□□ -0.26
CHMP3-201ENST00000263856 KCNK9Q9NPC2 374 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-201ENST00000263856 EP400Q96L91 3159 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 FOXN3O00409 490 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-201ENST00000263856 TGFB1I1O43294 461 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 SPOPO43791 374 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 CCDC172P0C7W6 258 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 SWT1Q5T5J6 900 aaKnown RBP13.4□□□□□ -0.26
CHMP3-201ENST00000263856 AGBL2Q5U5Z8 902 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 RINT1Q6NUQ1 792 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 LRRC34Q8IZ02 419 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 FUKQ8N0W3 1084 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 ANKS4BQ8N8V4 417 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 ETNPPLQ8TBG4 499 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 ERP44Q9BS26 406 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 SAMD15Q9P1V8 674 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 RASAL2Q9UJF2 1139 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 ODF2LQ9ULJ1 636 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 COG5Q9UP83 839 aa13.4□□□□□ -0.26
CHMP3-201ENST00000263856 TNRC6CQ9HCJ0 1690 aaKnown RBP13.39□□□□□ -0.27
CHMP3-201ENST00000263856 PRKCIP41743 596 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 KIAA1755Q5JYT7 1200 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 ATP8B4Q8TF62 1192 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 TATDN2Q93075 761 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 NAP1L4Q99733 375 aaKnown RBP13.39□□□□□ -0.27
CHMP3-201ENST00000263856 MTFR1LQ9H019 292 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 YY1AP1Q9H869 796 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 KCNQ5Q9NR82 932 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 TPX2Q9ULW0 747 aaKnown RBP13.39□□□□□ -0.27
CHMP3-201ENST00000263856 ALG6Q9Y672 507 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 GAKO14976 1311 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 FTLP02792 175 aaPredicted RBP13.39□□□□□ -0.27
CHMP3-201ENST00000263856 GCLMP48507 274 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 LRCH2Q5VUJ6 765 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 C6orf89Q6UWU4 347 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 POP1Q99575 1024 aaKnown RBP13.39□□□□□ -0.27
CHMP3-201ENST00000263856 ACTR5Q9H9F9 607 aaPredicted RBP13.39□□□□□ -0.27
CHMP3-201ENST00000263856 SWAP70Q9UH65 585 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 STXBP5LQ9Y2K9 1186 aa13.39□□□□□ -0.27
CHMP3-201ENST00000263856 F5H6K3 240 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 JAM2P57087 298 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 KLRC3Q07444 240 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 SPIRE1Q08AE8 756 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 LONRF1Q17RB8 773 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 SEL1L2Q5TEA6 688 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 YTHDF3Q7Z739 585 aaKnown RBP13.38□□□□□ -0.27
CHMP3-201ENST00000263856 GDAP1Q8TB36 358 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 RNF25Q96BH1 459 aaPredicted RBP13.38□□□□□ -0.27
CHMP3-201ENST00000263856 PARVGQ9HBI0 331 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 GEMIN8Q9NWZ8 242 aaKnown RBP13.38□□□□□ -0.27
CHMP3-201ENST00000263856 TBK1Q9UHD2 729 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 MYO3BQ8WXR4 1341 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 TCRBV7S2A1N4TA0A589 114 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 GOLGA8IPA6NC78 632 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 GOLGA8JA6NMD2 632 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 CES2O00748 559 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 DDX3YO15523 660 aaKnown RBP13.38□□□□□ -0.27
CHMP3-201ENST00000263856 DRD4P21917 467 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 GJC1P36383 396 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 DLG4P78352 724 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 DPY19L2P1Q6NXN4 242 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 CCDC137Q6PK04 289 aaKnown RBP13.38□□□□□ -0.27
CHMP3-201ENST00000263856 KAT5Q92993 513 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 THOC1Q96FV9 657 aaKnown RBP13.38□□□□□ -0.27
CHMP3-201ENST00000263856 MTRF1LQ9UGC7 380 aaKnown RBP13.38□□□□□ -0.27
CHMP3-201ENST00000263856 CDK5RAP2Q96SN8 1893 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 IGKV6D-41A0A0C4DH26 115 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 DDTLA6NHG4 134 aaPredicted RBP13.38□□□□□ -0.27
CHMP3-201ENST00000263856 BTNL10A8MVZ5 291 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 RPL21P46778 160 aaKnown RBP13.38□□□□□ -0.27
CHMP3-201ENST00000263856 PTENP60484 403 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms