RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 DUSP6Q16828 381 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 LONRF3Q496Y0 759 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 CES5AQ6NT32 575 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 MOXD1Q6UVY6 613 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 GLB1LQ6UWU2 654 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 NEK8Q86SG6 692 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 DAGLBQ8NCG7 672 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 SMRP1Q8NCR6 262 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 PGBD4Q96DM1 585 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 MSLNLQ96KJ4 702 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 CEP170P1Q96L14 293 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 CASD1Q96PB1 797 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 FDXACB1Q9BRP7 624 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-202ENST00000262396 APOL5Q9BWW9 433 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 PHF7Q9BWX1 381 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-202ENST00000262396 CWH43Q9H720 699 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 CHST12Q9NRB3 414 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 TSHZ2Q9NRE2 1034 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 MYO7AQ13402 2215 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 CYP3A7-CYP3A51PA0A087WV96 503 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 A0A0U1RQF3 1178 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 CARNS1A5YM72 827 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 TMEM150BA6NC51 233 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRAF4-202ENST00000262396 EYA4O95677 639 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 GCFC2P16383 781 aaKnown RBP13.72□□□□□ -0.21
TRAF4-202ENST00000262396 CYP3A7P24462 503 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 QARSP47897 775 aaKnown RBP13.72□□□□□ -0.21
TRAF4-202ENST00000262396 NCBP1Q09161 790 aaKnown RBP13.72□□□□□ -0.21
TRAF4-202ENST00000262396 TRIM29Q14134 588 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 TPRNQ4KMQ1 711 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 NCAPH2Q6IBW4 605 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 PIK3AP1Q6ZUJ8 805 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 OTUD6AQ7L8S5 288 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 ZNF410Q86VK4 478 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 SUGP1Q8IWZ8 645 aaKnown RBP13.72□□□□□ -0.21
TRAF4-202ENST00000262396 URGCPQ8TCY9 931 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 FAM20AQ96MK3 541 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 AIFM3Q96NN9 605 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 FAM193BQ96PV7 902 aaPredicted RBP13.72□□□□□ -0.21
TRAF4-202ENST00000262396 NIFKQ9BYG3 293 aaKnown RBP13.72□□□□□ -0.21
TRAF4-202ENST00000262396 GBP3Q9H0R5 595 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 CLEC1BQ9P126 229 aa13.72□□□□□ -0.21
TRAF4-202ENST00000262396 MYH9P35579 1960 aaKnown RBP13.71□□□□□ -0.21
TRAF4-202ENST00000262396 NT5C1B-RDH14C9J2C7 533 aa13.71□□□□□ -0.21
TRAF4-202ENST00000262396 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.21
TRAF4-202ENST00000262396 CXCL14O95715 111 aa13.71□□□□□ -0.21
TRAF4-202ENST00000262396 RAB27AP51159 221 aa13.71□□□□□ -0.21
TRAF4-202ENST00000262396 BCAR1P56945 870 aa13.71□□□□□ -0.21
TRAF4-202ENST00000262396 PLA2G4FQ68DD2 849 aa13.71□□□□□ -0.21
TRAF4-202ENST00000262396 LINC01465Q8N7H1 131 aa13.71□□□□□ -0.21
TRAF4-202ENST00000262396 PSPC1Q8WXF1 523 aaKnown RBP13.71□□□□□ -0.21
TRAF4-202ENST00000262396 RSPH1Q8WYR4 309 aa13.71□□□□□ -0.21
TRAF4-202ENST00000262396 CASP10Q92851 521 aa13.71□□□□□ -0.21
TRAF4-202ENST00000262396 BMP2KQ9NSY1 1161 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-202ENST00000262396 ORC3Q9UBD5 711 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-202ENST00000262396 EVPLQ92817 2033 aa13.71□□□□□ -0.22
TRAF4-202ENST00000262396 MAFO75444 373 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-202ENST00000262396 GLP2RO95838 553 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 P4HBP07237 508 aaKnown RBP13.7□□□□□ -0.22
TRAF4-202ENST00000262396 SRGAP2CP0DJJ0 459 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 SP100P23497 879 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-202ENST00000262396 PHKA2P46019 1235 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 SCRN1Q12765 414 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 DRP2Q13474 957 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 TARBP2Q15633 366 aaKnown RBP13.7□□□□□ -0.22
TRAF4-202ENST00000262396 HERC4Q5GLZ8 1057 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-202ENST00000262396 CLLU1OSQ5K130 101 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 ANKRD54Q6NXT1 300 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 LRRC55Q6ZSA7 311 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 SLFN12Q8IYM2 578 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 ETNPPLQ8TBG4 499 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 TCP11Q8WWU5 503 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 EDAQ92838 391 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 PBXIP1Q96AQ6 731 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 CYP26B1Q9NR63 512 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 NR2E1Q9Y466 385 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 COL4A3BPQ9Y5P4 624 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 LOXHD1Q8IVV2 1947 aa13.7□□□□□ -0.22
TRAF4-202ENST00000262396 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-202ENST00000262396 HIDE1A8MVS5 230 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 FSCN2O14926 492 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 SLC37A4O43826 429 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 ERLIN2O94905 339 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 HOXB8P17481 243 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-202ENST00000262396 ATF7P17544 494 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-202ENST00000262396 KRT2P35908 639 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 RFC5P40937 340 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 NPEPPSP55786 919 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 RBM10P98175 930 aaKnown RBP13.69□□□□□ -0.22
TRAF4-202ENST00000262396 CBX2Q14781 532 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-202ENST00000262396 XKR9Q5GH70 373 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 NOMO2Q5JPE7 1267 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 PPP4R3AQ6IN85 833 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 KSR1Q8IVT5 923 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 TPH2Q8IWU9 490 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 VPS52Q8N1B4 723 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 LPPQ93052 612 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 PHF20Q9BVI0 1012 aa13.69□□□□□ -0.22
TRAF4-202ENST00000262396 FAM105AQ9NUU6 356 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms