RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 USP17L5A8MUK1 530 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 CDK17Q00537 523 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 NAALADL2Q58DX5 795 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 GPATCH4Q5T3I0 446 aaKnown RBP17.38■□□□□ 0.37
SREBF1-201ENST00000261646 BARGINQ6ZT62 677 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 MIER3Q7Z3K6 550 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 SMC1BQ8NDV3 1235 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 MXD3Q9BW11 206 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 PPFIA2O75334 1257 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 TRIM49P0CI25 452 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 TRIM49CP0CI26 452 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 CDC25CP30307 473 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 COPS2P61201 443 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 PREPLQ4J6C6 727 aaPredicted RBP17.38■□□□□ 0.37
SREBF1-201ENST00000261646 HSP90AA5PQ58FG0 334 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 MAP3K21Q5TCX8 1036 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 SLFN13Q68D06 897 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 ST13P4Q8IZP2 240 aaPredicted RBP17.38■□□□□ 0.37
SREBF1-201ENST00000261646 GRAMD1AQ96CP6 724 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 PPARGC1AQ9UBK2 798 aaKnown RBP17.38■□□□□ 0.37
SREBF1-201ENST00000261646 USP17L15C9J2P7 530 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 USP17L13C9JLJ4 530 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 USP17L11C9JVI0 530 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 USP17L18D6R9N7 530 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 USP17L22D6RA61 530 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 USP17L17D6RBQ6 530 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 USP17L19D6RCP7 530 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 USP17L20D6RJB6 530 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 NDC80O14777 642 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 MYBL1P10243 752 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 USP17L24Q0WX57 530 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 GRAMD1BQ3KR37 738 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 RBM26Q5T8P6 1007 aaKnown RBP17.38■□□□□ 0.37
SREBF1-201ENST00000261646 USP17L6PQ6QN14 398 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 CEP120Q8N960 986 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 IWS1Q96ST2 819 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 CENPKQ9BS16 269 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 PABPC3Q9H361 631 aaKnown RBP17.38■□□□□ 0.37
SREBF1-201ENST00000261646 Q9H521 79 aa17.38■□□□□ 0.37
SREBF1-201ENST00000261646 NPHP3-ACAD11A0A0J9YXS1 232 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 MYCLP12524 364 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-201ENST00000261646 ERVK-9P63128 1117 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 DYNLT1P63172 113 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 FAM102BQ5T8I3 360 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 WDR59Q6PJI9 974 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 CPXCR1Q8N123 301 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 SUPT20HQ8NEM7 779 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 ATP2A3Q93084 1043 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 C9orf72Q96LT7 481 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 TRPC6Q9Y210 931 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 ORC4O43929 436 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 CTCFP49711 727 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-201ENST00000261646 PPP2R5DQ14738 602 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 PPP4R1Q8TF05 950 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 KDM4CQ9H3R0 1056 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 KBTBD4Q9NVX7 518 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 CNOT8Q9UFF9 292 aaKnown RBP17.37■□□□□ 0.37
SREBF1-201ENST00000261646 REXO2Q9Y3B8 237 aaKnown RBP17.37■□□□□ 0.37
SREBF1-201ENST00000261646 hCG_2014768A0A024R1R8 64 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 TRPA1O75762 1119 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 TMED1Q13445 227 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 KYNUQ16719 465 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 PYROXD1Q8WU10 500 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 DNAJC9Q8WXX5 260 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 KAT2BQ92831 832 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 FAM161BQ96MY7 647 aa17.37■□□□□ 0.37
SREBF1-201ENST00000261646 BSDC1Q9NW68 430 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-201ENST00000261646 TNS3Q68CZ2 1445 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 CTTNQ14247 550 aaKnown RBP17.36■□□□□ 0.37
SREBF1-201ENST00000261646 TBC1D9BQ66K14 1250 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 FAM196AQ6ZSG2 479 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 SPICE1Q8N0Z3 855 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 FBXO25Q8TCJ0 367 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 HAUS1Q96CS2 278 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 AMNQ9BXJ7 453 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 NAGPAQ9UK23 515 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 BCS1LQ9Y276 419 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 GCLMP48507 274 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 ZNF844Q08AG5 666 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 MKRN3Q13064 507 aaKnown RBP17.36■□□□□ 0.37
SREBF1-201ENST00000261646 TRPC3Q13507 836 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 MEA1Q16626 185 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 NUF2Q9BZD4 464 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 MAD1L1Q9Y6D9 718 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 STAT3P40763 770 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 RASA3Q14644 834 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 PIP4K2CQ8TBX8 421 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 RBM17Q96I25 401 aaKnown RBP17.36■□□□□ 0.37
SREBF1-201ENST00000261646 FAM129AQ9BZQ8 928 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 SEMA6BQ9H3T3 888 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 hCG_1984214I3L0E3 225 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 CPP00450 1065 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 ITGA4P13612 1032 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 SOX5P35711 763 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 SNAP25P60880 206 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 KRT17Q04695 432 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 DBN1Q16643 649 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 SH3RF1Q7Z6J0 888 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 ZNF713Q8N859 430 aaPredicted RBP17.36■□□□□ 0.37
SREBF1-201ENST00000261646 EPS8L3Q8TE67 593 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms