RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TAPT1Q6NXT6 567 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 PLEKHH3Q7Z736 793 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 SLC9A9Q8IVB4 645 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 NEK11Q8NG66 645 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 CBWD1Q9BRT8 395 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 PCIF1Q9H4Z3 704 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 FRMD4BQ9Y2L6 1034 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 ZSCAN12O43309 604 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 RTP1P59025 263 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 APBA1Q02410 837 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 PPP2R3AQ06190 1150 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 LSM14BQ9BX40 385 aaKnown RBP24.49■■□□□ 1.51
SIX3-201ENST00000260653 NRBP2Q9NSY0 501 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 DIS3Q9Y2L1 958 aaKnown RBP24.49■■□□□ 1.51
SIX3-201ENST00000260653 MANSC4A6NHS7 340 aaPredicted RBP24.48■■□□□ 1.51
SIX3-201ENST00000260653 EXOC3O60645 756 aa24.48■■□□□ 1.51
SIX3-201ENST00000260653 MAPK4P31152 587 aa24.48■■□□□ 1.51
SIX3-201ENST00000260653 TARBP2Q15633 366 aaKnown RBP24.48■■□□□ 1.51
SIX3-201ENST00000260653 TSR1Q2NL82 804 aaKnown RBP24.48■■□□□ 1.51
SIX3-201ENST00000260653 ZNF397Q8NF99 534 aaPredicted RBP24.48■■□□□ 1.51
SIX3-201ENST00000260653 ADGRA2Q96PE1 1338 aa24.48■■□□□ 1.51
SIX3-201ENST00000260653 DOCK3Q8IZD9 2030 aa24.48■■□□□ 1.51
SIX3-201ENST00000260653 LGR5O75473 907 aa24.48■■□□□ 1.51
SIX3-201ENST00000260653 MEA1Q16626 185 aa24.48■■□□□ 1.51
SIX3-201ENST00000260653 ZNF467Q7Z7K2 595 aaPredicted RBP24.48■■□□□ 1.51
SIX3-201ENST00000260653 MAP4K3Q8IVH8 894 aa24.48■■□□□ 1.51
SIX3-201ENST00000260653 SLC7A3Q8WY07 619 aa24.48■■□□□ 1.51
SIX3-201ENST00000260653 VTA1Q9NP79 307 aa24.48■■□□□ 1.51
SIX3-201ENST00000260653 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.48■■□□□ 1.51
SIX3-201ENST00000260653 ADGRG1Q9Y653 693 aa24.48■■□□□ 1.51
SIX3-201ENST00000260653 NOL4O94818 638 aa24.47■■□□□ 1.51
SIX3-201ENST00000260653 RDH13Q8NBN7 331 aa24.47■■□□□ 1.51
SIX3-201ENST00000260653 IFT74Q96LB3 600 aa24.47■■□□□ 1.51
SIX3-201ENST00000260653 PASKQ96RG2 1323 aa24.47■■□□□ 1.51
SIX3-201ENST00000260653 SNAI1O95863 264 aaPredicted RBP24.46■■□□□ 1.51
SIX3-201ENST00000260653 TAF1CQ15572 869 aaPredicted RBP24.46■■□□□ 1.51
SIX3-201ENST00000260653 MAML3Q96JK9 1138 aa24.46■■□□□ 1.51
SIX3-201ENST00000260653 KATNBL1Q9H079 304 aa24.46■■□□□ 1.51
SIX3-201ENST00000260653 CCDC175P0C221 793 aa24.46■■□□□ 1.51
SIX3-201ENST00000260653 MYBPC2Q14324 1141 aa24.46■■□□□ 1.51
SIX3-201ENST00000260653 C12orf56Q8IXR9 622 aa24.46■■□□□ 1.51
SIX3-201ENST00000260653 ZSWIM2Q8NEG5 633 aa24.46■■□□□ 1.51
SIX3-201ENST00000260653 ASAP3Q8TDY4 903 aa24.46■■□□□ 1.51
SIX3-201ENST00000260653 BAP1Q92560 729 aa24.46■■□□□ 1.51
SIX3-201ENST00000260653 HVCN1Q96D96 273 aa24.46■■□□□ 1.51
SIX3-201ENST00000260653 ARHGAP1Q07960 439 aa24.45■■□□□ 1.51
SIX3-201ENST00000260653 MAMDC4Q6UXC1 1216 aa24.45■■□□□ 1.51
SIX3-201ENST00000260653 ACRBPQ8NEB7 543 aa24.45■■□□□ 1.51
SIX3-201ENST00000260653 FAM167AQ96KS9 214 aa24.45■■□□□ 1.51
SIX3-201ENST00000260653 HSPBP1Q9NZL4 362 aa24.45■■□□□ 1.51
SIX3-201ENST00000260653 CGNQ9P2M7 1197 aaKnown RBP24.45■■□□□ 1.51
SIX3-201ENST00000260653 EXOC7Q9UPT5 735 aa24.45■■□□□ 1.51
SIX3-201ENST00000260653 EMSYQ7Z589 1322 aa24.45■■□□□ 1.5
SIX3-201ENST00000260653 ANKRD63C9JTQ0 380 aa24.45■■□□□ 1.5
SIX3-201ENST00000260653 SLC10A3P09131 477 aa24.45■■□□□ 1.5
SIX3-201ENST00000260653 ZNF592Q92610 1267 aa24.45■■□□□ 1.5
SIX3-201ENST00000260653 NLRC4Q9NPP4 1024 aa24.45■■□□□ 1.5
SIX3-201ENST00000260653 ARHGAP28Q9P2N2 729 aa24.45■■□□□ 1.5
SIX3-201ENST00000260653 LRRC53A6NM62 1247 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 RFC5P40937 340 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 ADCYAP1R1P41586 468 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 RRAGAQ7L523 313 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 TAS1R3Q7RTX0 852 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 PLPPR4Q7Z2D5 763 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 CACNA2D4Q7Z3S7 1137 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 NPLOC4Q8TAT6 608 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 TMEM174Q8WUU8 243 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 BBXQ8WY36 941 aaPredicted RBP24.44■■□□□ 1.5
SIX3-201ENST00000260653 ZNHIT6Q9NWK9 470 aaKnown RBP24.44■■□□□ 1.5
SIX3-201ENST00000260653 A0A0U1RQJ8 604 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 GLRA2P23416 452 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 ADSSP30520 456 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 GPIHBP1Q8IV16 184 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 ATRIPQ8WXE1 791 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 CEP72Q9P209 647 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 PLAGL2Q9UPG8 496 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 PCNTO95613 3336 aa24.44■■□□□ 1.5
SIX3-201ENST00000260653 TRIM49P0CI25 452 aa24.43■■□□□ 1.5
SIX3-201ENST00000260653 TRIM49CP0CI26 452 aa24.43■■□□□ 1.5
SIX3-201ENST00000260653 SLC9A1P19634 815 aa24.43■■□□□ 1.5
SIX3-201ENST00000260653 ARL2P36404 184 aa24.43■■□□□ 1.5
SIX3-201ENST00000260653 POLR2FP61218 127 aaKnown RBP24.43■■□□□ 1.5
SIX3-201ENST00000260653 ATP8B4Q8TF62 1192 aa24.43■■□□□ 1.5
SIX3-201ENST00000260653 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.43■■□□□ 1.5
SIX3-201ENST00000260653 RBM47A0AV96 593 aaKnown RBP24.43■■□□□ 1.5
SIX3-201ENST00000260653 ACTN1P12814 892 aa24.43■■□□□ 1.5
SIX3-201ENST00000260653 CNGA1P29973 690 aa24.43■■□□□ 1.5
SIX3-201ENST00000260653 BFSP1Q12934 665 aa24.43■■□□□ 1.5
SIX3-201ENST00000260653 PLCB4Q15147 1175 aa24.43■■□□□ 1.5
SIX3-201ENST00000260653 EXOC3L4Q17RC7 722 aa24.43■■□□□ 1.5
SIX3-201ENST00000260653 SLC39A4Q6P5W5 647 aa24.43■■□□□ 1.5
SIX3-201ENST00000260653 XXYLT1Q8NBI6 393 aa24.43■■□□□ 1.5
SIX3-201ENST00000260653 SLC15A5A6NIM6 579 aa24.42■■□□□ 1.5
SIX3-201ENST00000260653 ZBTB42B2RXF5 422 aa24.42■■□□□ 1.5
SIX3-201ENST00000260653 HNRNPH3P31942 346 aaKnown RBP24.42■■□□□ 1.5
SIX3-201ENST00000260653 SNRPFP62306 86 aaKnown RBP24.42■■□□□ 1.5
SIX3-201ENST00000260653 DRP2Q13474 957 aa24.42■■□□□ 1.5
SIX3-201ENST00000260653 IFNL1Q8IU54 200 aa24.42■■□□□ 1.5
SIX3-201ENST00000260653 TINF2Q9BSI4 451 aa24.42■■□□□ 1.5
SIX3-201ENST00000260653 EDEM3Q9BZQ6 932 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms