RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 GPR25O00155 361 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 TACC1O75410 805 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 AFPP02771 609 aaKnown RBP12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 NR3C1P04150 777 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 XRCC5P13010 732 aaKnown RBP12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 CYP2B6P20813 491 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 MAGEA1P43355 309 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 CKAP4Q07065 602 aaKnown RBP12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 MTMR1Q13613 665 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 BRD3Q15059 726 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 CCL14Q16627 93 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 TDRD12Q587J7 1177 aaKnown RBP12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 PAPD7Q5XG87 772 aaKnown RBP12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 XRRA1Q6P2D8 792 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 SEPT14Q6ZU15 432 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 TRIM58Q8NG06 486 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 CD99L2Q8TCZ2 262 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 USP6NLQ92738 828 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 MAML3Q96JK9 1138 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 INPP4AQ96PE3 977 aaPredicted RBP12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 CRACR2AQ9BSW2 395 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 EPC1Q9H2F5 836 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 ARFGAP3Q9NP61 516 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 FLRT1Q9NZU1 646 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 ODF2LQ9ULJ1 636 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 UBE4BO95155 1302 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 DOCK5Q9H7D0 1870 aa12.48□□□□□ -0.41
CLUHP3-201ENST00000254109 ARHGEF35A5YM69 484 aa12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 ENC1O14682 589 aa12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 ZNF263O14978 683 aa12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 ATP9AO75110 1047 aa12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 EIF3JO75822 258 aaKnown RBP12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 NOL4O94818 638 aa12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 ATP1A1P05023 1023 aaKnown RBP12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 TUBBP07437 444 aa12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 HOXD13P35453 343 aa12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 ARMCX2Q7L311 632 aa12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 FBXO16Q8IX29 292 aaPredicted RBP12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 SMAP1Q8IYB5 467 aaPredicted RBP12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 ALS2CR12Q96Q35 445 aa12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 BCAS3Q9H6U6 928 aa12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 AGO4Q9HCK5 861 aaKnown RBP12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 FAM53CQ9NYF3 392 aa12.47□□□□□ -0.41
CLUHP3-201ENST00000254109 SFI1A8K8P3 1242 aa12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 DDX39AO00148 427 aaKnown RBP12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 SORBS3O60504 671 aa12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 ZSCAN20P17040 1043 aaPredicted RBP12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 MAP2K1Q02750 393 aaPredicted RBP12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 ASIC2Q16515 512 aa12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 CC2D1AQ6P1N0 951 aaPredicted RBP12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 MIER3Q7Z3K6 550 aa12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 FAM178BQ8IXR5 827 aa12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 MORC4Q8TE76 937 aa12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 ZNF296Q8WUU4 475 aaPredicted RBP12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 RPGRIP1Q96KN7 1286 aa12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 LXNQ9BS40 222 aa12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 PDGFCQ9NRA1 345 aa12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 DIS3Q9Y2L1 958 aaKnown RBP12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 JRKLQ9Y4A0 524 aa12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 PCDHB13Q9Y5F0 798 aa12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 DUSP10Q9Y6W6 482 aa12.46□□□□□ -0.41
CLUHP3-201ENST00000254109 CCDC151A5D8V7 595 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 ASB14A6NK59 587 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 ERLIN1O75477 346 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 ZRANB2O95218 330 aaKnown RBP eCLIP12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 SNAI1O95863 264 aaPredicted RBP12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 SP2Q02086 613 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 PRKCZQ05513 592 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 ITGB3BPQ13352 177 aaPredicted RBP12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 RAPGEF1Q13905 1077 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 KIF22Q14807 665 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 NFIL3Q16649 462 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 ASTE1Q2TB18 679 aaPredicted RBP12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 DCAF17Q5H9S7 520 aaPredicted RBP12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 TCERG1LQ5VWI1 586 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 B3GNT9Q6UX72 402 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 ZNF467Q7Z7K2 595 aaPredicted RBP12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 NLRX1Q86UT6 975 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 MSANTD4Q8NCY6 345 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 GPRASP2Q96D09 838 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 POLD4Q9HCU8 107 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 PLCB1Q9NQ66 1216 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 SAGE1Q9NXZ1 904 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 AIPL1Q9NZN9 384 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 HDAC6Q9UBN7 1215 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 FHOD1Q9Y613 1164 aa12.46□□□□□ -0.42
CLUHP3-201ENST00000254109 SPATA31C2B4DYI2 1134 aa12.45□□□□□ -0.42
CLUHP3-201ENST00000254109 RBAK-RBAKDNI3L0D1 243 aa12.45□□□□□ -0.42
CLUHP3-201ENST00000254109 ZBTB39O15060 712 aa12.45□□□□□ -0.42
CLUHP3-201ENST00000254109 PJA2O43164 708 aa12.45□□□□□ -0.42
CLUHP3-201ENST00000254109 STAM2O75886 525 aa12.45□□□□□ -0.42
CLUHP3-201ENST00000254109 AKAP3O75969 853 aa12.45□□□□□ -0.42
CLUHP3-201ENST00000254109 P4HBP07237 508 aaKnown RBP12.45□□□□□ -0.42
CLUHP3-201ENST00000254109 HOXC6P09630 235 aa12.45□□□□□ -0.42
CLUHP3-201ENST00000254109 PNMA6AP0CW24 399 aaPredicted RBP12.45□□□□□ -0.42
CLUHP3-201ENST00000254109 GUCY2CP25092 1073 aa12.45□□□□□ -0.42
CLUHP3-201ENST00000254109 NMT1P30419 496 aaKnown RBP12.45□□□□□ -0.42
CLUHP3-201ENST00000254109 PSMC2P35998 433 aaKnown RBP12.45□□□□□ -0.42
CLUHP3-201ENST00000254109 RGS2P41220 211 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms