RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 EPHA7Q15375 998 aa16.34■□□□□ 0.21
SAFB2-201ENST00000252542 GADL1Q6ZQY3 521 aa16.34■□□□□ 0.21
SAFB2-201ENST00000252542 DPH6Q7L8W6 267 aa16.34■□□□□ 0.21
SAFB2-201ENST00000252542 CDR2LQ86X02 465 aaPredicted RBP16.34■□□□□ 0.21
SAFB2-201ENST00000252542 NCAPG2Q86XI2 1143 aa16.34■□□□□ 0.21
SAFB2-201ENST00000252542 TMEM143Q96AN5 459 aa16.34■□□□□ 0.21
SAFB2-201ENST00000252542 METTL14Q9HCE5 456 aaKnown RBP16.34■□□□□ 0.21
SAFB2-201ENST00000252542 TAS2R14Q9NYV8 317 aa16.34■□□□□ 0.21
SAFB2-201ENST00000252542 DENND3A2RUS2 1198 aa16.33■□□□□ 0.2
SAFB2-201ENST00000252542 FOXN3O00409 490 aaPredicted RBP16.33■□□□□ 0.2
SAFB2-201ENST00000252542 TNNI1P19237 187 aa16.33■□□□□ 0.2
SAFB2-201ENST00000252542 SLC30A5Q8TAD4 765 aa16.33■□□□□ 0.2
SAFB2-201ENST00000252542 SLC20A1Q8WUM9 679 aa16.33■□□□□ 0.2
SAFB2-201ENST00000252542 HNRNPLLQ8WVV9 542 aaKnown RBP16.33■□□□□ 0.2
SAFB2-201ENST00000252542 BTBD6Q96KE9 485 aa16.33■□□□□ 0.2
SAFB2-201ENST00000252542 GINS2Q9Y248 185 aa16.33■□□□□ 0.2
SAFB2-201ENST00000252542 PITPNM2Q9BZ72 1349 aa16.33■□□□□ 0.2
SAFB2-201ENST00000252542 KRIT1O00522 736 aa16.33■□□□□ 0.2
SAFB2-201ENST00000252542 ODF2Q5BJF6 829 aa16.33■□□□□ 0.2
SAFB2-201ENST00000252542 PALB2Q86YC2 1186 aa16.33■□□□□ 0.2
SAFB2-201ENST00000252542 MSANTD4Q8NCY6 345 aa16.33■□□□□ 0.2
SAFB2-201ENST00000252542 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 CNTNAP1P78357 1384 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 ICAM1P05362 532 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 P4HBP07237 508 aaKnown RBP16.32■□□□□ 0.2
SAFB2-201ENST00000252542 GALCP54803 685 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 MRPS9P82933 396 aaKnown RBP16.32■□□□□ 0.2
SAFB2-201ENST00000252542 PAPD7Q5XG87 772 aaKnown RBP16.32■□□□□ 0.2
SAFB2-201ENST00000252542 INTS2Q9H0H0 1204 aaKnown RBP16.32■□□□□ 0.2
SAFB2-201ENST00000252542 NAGPAQ9UK23 515 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 RAB21Q9UL25 225 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 H0YHG0 523 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 GAP43P17677 238 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 EDRF1Q3B7T1 1238 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 FRMD5Q7Z6J6 570 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 DHX37Q8IY37 1157 aaKnown RBP16.32■□□□□ 0.2
SAFB2-201ENST00000252542 SH2D3CQ8N5H7 860 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 POLR3CQ9BUI4 534 aaPredicted RBP16.32■□□□□ 0.2
SAFB2-201ENST00000252542 CELF4Q9BZC1 486 aaKnown RBP16.32■□□□□ 0.2
SAFB2-201ENST00000252542 KMT5AQ9NQR1 393 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 SCN9AQ15858 1988 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 GOLGA6CA6NDK9 693 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 GOLGA6DP0CG33 693 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 MAGEA9P43362 315 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 AADACL2Q6P093 401 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 MCF2L2Q86YR7 1114 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 DHX38Q92620 1227 aaKnown RBP16.32■□□□□ 0.2
SAFB2-201ENST00000252542 FAM213AQ9BRX8 229 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 GOLGA6AQ9NYA3 693 aa16.32■□□□□ 0.2
SAFB2-201ENST00000252542 MYH7BA7E2Y1 1941 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 TLDC2A0PJX2 215 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 NR3C2P08235 984 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 ACOT2P49753 483 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 VPS41P49754 854 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 PPM1EQ8WY54 764 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 RANBP17Q9H2T7 1088 aaKnown RBP16.31■□□□□ 0.2
SAFB2-201ENST00000252542 MED4Q9NPJ6 270 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 AMACRQ9UHK6 382 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 CYP26A1O43174 497 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 SMTNP53814 917 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 TUBB2AQ13885 445 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 ZNF394Q53GI3 561 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 FIGNQ5HY92 759 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 ICE2Q659A1 982 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 MOB2Q70IA6 237 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 CCDC25Q86WR0 208 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 PASD1Q8IV76 773 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 FAM76AQ8TAV0 307 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 TUBB2BQ9BVA1 445 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 MRIQ9BWK5 157 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 PTPN22Q9Y2R2 807 aa16.31■□□□□ 0.2
SAFB2-201ENST00000252542 KRT14P02533 472 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 GLI1P08151 1106 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 CYP3A4P08684 503 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 ITGA4P13612 1032 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 MXI1P50539 228 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 CNTN2Q02246 1040 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 UBLCP1Q8WVY7 318 aaPredicted RBP16.3■□□□□ 0.2
SAFB2-201ENST00000252542 CCDC113Q9H0I3 377 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 GANQ9H2C0 597 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 TUFT1Q9NNX1 390 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 GRID2IPA4D2P6 1211 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 KCNA3P22001 575 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 CIITAP33076 1130 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 RARRES1P49788 294 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 SLC5A5Q92911 643 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 NUCKS1Q9H1E3 243 aaKnown RBP16.3■□□□□ 0.2
SAFB2-201ENST00000252542 EFCC1Q9HA90 598 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 HSPBP1Q9NZL4 362 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 VAMP7P51809 220 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 MNAT1P51948 309 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 DMP1Q13316 513 aaPredicted RBP16.3■□□□□ 0.2
SAFB2-201ENST00000252542 BTNL9Q6UXG8 535 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 ZBTB33Q86T24 672 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 OR2W6PQ8NHA6 318 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 TRPM4Q8TD43 1214 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 BCAS4Q8TDM0 211 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 PPP1R13LQ8WUF5 828 aa16.3■□□□□ 0.2
SAFB2-201ENST00000252542 USTQ9Y2C2 406 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms