RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 PHLDB3Q6NSJ2 640 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 KLHL7Q8IXQ5 586 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 GOLGA6L1Q8N7Z2 621 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 PBKQ96KB5 322 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 MYOZ2Q9NPC6 264 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 BCS1LQ9Y276 419 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 SAMM50Q9Y512 469 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 TMEM150BA6NC51 233 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 TMCO5BA8MYB1 307 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 CEP104O60308 925 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 LEKR1Q6ZMV7 388 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 PEX26Q7Z412 305 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 ACTRT1Q8TDG2 376 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 SYTL5Q8TDW5 730 aaPredicted RBP21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 SCFD2Q8WU76 684 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 OSGEPQ9NPF4 335 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 LARSQ9P2J5 1176 aaKnown RBP21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 FAM170AA1A519 330 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 LRRN2O75325 713 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 NNTQ13423 1086 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 MTMR1Q13613 665 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 ARHGAP44Q17R89 818 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 NT5DC3Q86UY8 548 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 MCF2L2Q86YR7 1114 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 TEPSINQ96N21 525 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 TAAR1Q96RJ0 339 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 SLC38A10Q9HBR0 1119 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 DBR1Q9UK59 544 aaKnown RBP21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 EGFRP00533 1210 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 EIF2AK2P19525 551 aaKnown RBP21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 LMNB1P20700 586 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 QARSP47897 775 aaKnown RBP21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 TNNC1P63316 161 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 MYBPC2Q14324 1141 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 TNIP1Q15025 636 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 UGCGQ16739 394 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 DAAM2Q86T65 1068 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 ZSWIM2Q8NEG5 633 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 CBWD1Q9BRT8 395 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 IGSF9BQ9UPX0 1349 aa21.23■□□□□ 0.99
CDC42EP1-201ENST00000249014 GOLGA6CA6NDK9 693 aa21.22■□□□□ 0.99
CDC42EP1-201ENST00000249014 RPS6KA5O75582 802 aa21.22■□□□□ 0.99
CDC42EP1-201ENST00000249014 GOLGA6DP0CG33 693 aa21.22■□□□□ 0.99
CDC42EP1-201ENST00000249014 NPEPPSP55786 919 aa21.22■□□□□ 0.99
CDC42EP1-201ENST00000249014 PAK2Q13177 524 aa21.22■□□□□ 0.99
CDC42EP1-201ENST00000249014 PALB2Q86YC2 1186 aa21.22■□□□□ 0.99
CDC42EP1-201ENST00000249014 LPAR1Q92633 364 aa21.22■□□□□ 0.99
CDC42EP1-201ENST00000249014 AP1M1Q9BXS5 423 aa21.22■□□□□ 0.99
CDC42EP1-201ENST00000249014 VPS33BQ9H267 617 aa21.22■□□□□ 0.99
CDC42EP1-201ENST00000249014 GOLGA6AQ9NYA3 693 aa21.22■□□□□ 0.99
CDC42EP1-201ENST00000249014 SUCLA2Q9P2R7 463 aaPredicted RBP21.22■□□□□ 0.99
CDC42EP1-201ENST00000249014 EMSYQ7Z589 1322 aa21.22■□□□□ 0.99
CDC42EP1-201ENST00000249014 FOXN3O00409 490 aaPredicted RBP21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 PLS3P13797 630 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 RPS6P62753 249 aaKnown RBP21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 ALS2CLQ60I27 953 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 LRRC31Q6UY01 552 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 SLC35G2Q8TBE7 412 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 LMBR1Q8WVP7 490 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 ZIM3Q96PE6 472 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 KIAA1683Q9H0B3 1180 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 TAS2R14Q9NYV8 317 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 NOC2LQ9Y3T9 749 aaKnown RBP21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 NCANO14594 1321 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 ASTN2O75129 1339 aaPredicted RBP21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 MAPTP10636 758 aaKnown RBP21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 ABCB4P21439 1286 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 YWHABP31946 246 aaKnown RBP21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 PPP3CAQ08209 521 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 PGM5Q15124 567 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 FOXR1Q6PIV2 292 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 TRMT1LQ7Z2T5 733 aaKnown RBP21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 FAM76AQ8TAV0 307 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 HES6Q96HZ4 224 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 TMEM206Q9H813 350 aa21.21■□□□□ 0.99
CDC42EP1-201ENST00000249014 PGRMC1O00264 195 aaKnown RBP21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 BUB1BO60566 1050 aaPredicted RBP21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 ATP9AO75110 1047 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 TMEM253P0C7T8 217 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 KRT13P13646 458 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 GUCY2FP51841 1108 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 C1orf220Q5T0J3 134 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 SYCE1Q8N0S2 351 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 GPRC5CQ9NQ84 441 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 HSF2BPO75031 334 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 LYPLA2O95372 231 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 VAMP7P51809 220 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 KIF22Q14807 665 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 INTS8Q75QN2 995 aaKnown RBP21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 ARHGEF19Q8IW93 802 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 RASGEF1CQ8N431 466 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 PROCA1Q8NCQ7 364 aaPredicted RBP21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 PLEKHO2Q8TD55 490 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 RFFLQ8WZ73 363 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 ARL8AQ96BM9 186 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 ACCSQ96QU6 501 aa21.2■□□□□ 0.98
CDC42EP1-201ENST00000249014 BACH1O14867 736 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 ERVK-9P63128 1117 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 ALCAMQ13740 583 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms