RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 STARD6P59095 220 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 GRM4Q14833 912 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 SEC23AQ15436 765 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 TICAM2Q86XR7 235 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 NETO1Q8TDF5 533 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 IGSF21Q96ID5 467 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 MYADMQ96S97 322 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 EMILIN2Q9BXX0 1053 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 PARD6AQ9NPB6 346 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 SLC2A4RGQ9NR83 387 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 ZSCAN32Q9NX65 697 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 UBIAD1Q9Y5Z9 338 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 SALL3Q9BXA9 1300 aa13.64□□□□□ -0.23
RFPL3-201ENST00000249007 CARNS1A5YM72 827 aa13.64□□□□□ -0.23
RFPL3-201ENST00000249007 HBP1O60381 514 aa13.64□□□□□ -0.23
RFPL3-201ENST00000249007 VTNP04004 478 aa13.64□□□□□ -0.23
RFPL3-201ENST00000249007 CMASQ8NFW8 434 aaPredicted RBP13.64□□□□□ -0.23
RFPL3-201ENST00000249007 CNNM2Q9H8M5 875 aa13.64□□□□□ -0.23
RFPL3-201ENST00000249007 JADE2Q9NQC1 790 aa13.64□□□□□ -0.23
RFPL3-201ENST00000249007 PATJQ8NI35 1801 aa13.64□□□□□ -0.23
RFPL3-201ENST00000249007 COL1A2P08123 1366 aa13.63□□□□□ -0.23
RFPL3-201ENST00000249007 DSPP15924 2871 aaKnown RBP13.63□□□□□ -0.23
RFPL3-201ENST00000249007 A0A0U1RQF3 1178 aa13.63□□□□□ -0.23
RFPL3-201ENST00000249007 KANSL1LA0AUZ9 987 aa13.63□□□□□ -0.23
RFPL3-201ENST00000249007 TBC1D4O60343 1298 aa13.63□□□□□ -0.23
RFPL3-201ENST00000249007 LILRB5O75023 590 aa13.63□□□□□ -0.23
RFPL3-201ENST00000249007 GPR32O75388 356 aa13.63□□□□□ -0.23
RFPL3-201ENST00000249007 CNPP09543 421 aaKnown RBP13.63□□□□□ -0.23
RFPL3-201ENST00000249007 KCNA4P22459 653 aa13.63□□□□□ -0.23
RFPL3-201ENST00000249007 WTAPQ15007 396 aa13.63□□□□□ -0.23
RFPL3-201ENST00000249007 ZNF598Q86UK7 904 aaKnown RBP13.63□□□□□ -0.23
RFPL3-201ENST00000249007 BCL7CQ8WUZ0 217 aaPredicted RBP13.63□□□□□ -0.23
RFPL3-201ENST00000249007 KLHL5Q96PQ7 755 aa13.63□□□□□ -0.23
RFPL3-201ENST00000249007 SDF4Q9BRK5 362 aa13.63□□□□□ -0.23
RFPL3-201ENST00000249007 MAN1C1Q9NR34 630 aa13.63□□□□□ -0.23
RFPL3-201ENST00000249007 KCNH7Q9NS40 1196 aa13.63□□□□□ -0.23
RFPL3-201ENST00000249007 GCN1Q92616 2671 aaKnown RBP13.63□□□□□ -0.23
RFPL3-201ENST00000249007 CCDC195A0A1B0GUA6 201 aa13.62□□□□□ -0.23
RFPL3-201ENST00000249007 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.62□□□□□ -0.23
RFPL3-201ENST00000249007 BACH1O14867 736 aa13.62□□□□□ -0.23
RFPL3-201ENST00000249007 IMMTQ16891 758 aaKnown RBP13.62□□□□□ -0.23
RFPL3-201ENST00000249007 C20orf194Q5TEA3 1177 aa13.62□□□□□ -0.23
RFPL3-201ENST00000249007 CYP26C1Q6V0L0 522 aa13.62□□□□□ -0.23
RFPL3-201ENST00000249007 METTL13Q8N6R0 699 aa13.62□□□□□ -0.23
RFPL3-201ENST00000249007 COL26A1Q96A83 441 aa13.62□□□□□ -0.23
RFPL3-201ENST00000249007 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.62□□□□□ -0.23
RFPL3-201ENST00000249007 ZBTB42B2RXF5 422 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 ANHXE9PGG2 379 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 C22orf31O95567 290 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 SSBP05455 408 aaKnown RBP eCLIP13.61□□□□□ -0.23
RFPL3-201ENST00000249007 LAMP2P13473 410 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 SPEM2Q0P670 501 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 SNW1Q13573 536 aaKnown RBP13.61□□□□□ -0.23
RFPL3-201ENST00000249007 HTR4Q13639 388 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 GSE1Q14687 1217 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 UBXN2BQ14CS0 331 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 ZNF484Q5JVG2 852 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 ELMSAN1Q6PJG2 1045 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 SMG7Q92540 1137 aaKnown RBP13.61□□□□□ -0.23
RFPL3-201ENST00000249007 NELL1Q92832 810 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 VN1R3Q9BXE9 311 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 RHOBTB2Q9BYZ6 727 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.61□□□□□ -0.23
RFPL3-201ENST00000249007 NUMBLQ9Y6R0 609 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 NFASCO94856 1347 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 F5P12259 2224 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 INPPL1O15357 1258 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 GALTP07902 379 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 EIF4BP23588 611 aaKnown RBP13.61□□□□□ -0.23
RFPL3-201ENST00000249007 FAM160B1Q5W0V3 765 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 ST13P5Q8NFI4 369 aaPredicted RBP13.61□□□□□ -0.23
RFPL3-201ENST00000249007 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
RFPL3-201ENST00000249007 RSPH1Q8WYR4 309 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 DDX23Q9BUQ8 820 aaKnown RBP13.61□□□□□ -0.23
RFPL3-201ENST00000249007 PSTPIP2Q9H939 334 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 MRPL17Q9NRX2 175 aaKnown RBP13.61□□□□□ -0.23
RFPL3-201ENST00000249007 DACT1Q9NYF0 836 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 STK39Q9UEW8 545 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 DPP7Q9UHL4 492 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 RAB23Q9ULC3 237 aa13.61□□□□□ -0.23
RFPL3-201ENST00000249007 MTF2Q9Y483 593 aaPredicted RBP13.61□□□□□ -0.23
RFPL3-201ENST00000249007 IGKV6D-21A0A0A0MT36 114 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 SPDYE3A6NKU9 549 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 FAM170BA6NMN3 283 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 RFPL2O75678 378 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 ATG7O95352 703 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 MAGEA9P43362 315 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 PDE1AP54750 535 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 NLRP11P59045 1033 aaKnown RBP13.6□□□□□ -0.23
RFPL3-201ENST00000249007 GPC5P78333 572 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 RNASELQ05823 741 aaKnown RBP13.6□□□□□ -0.23
RFPL3-201ENST00000249007 TROAPQ12815 778 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 PDXDC2PQ6P474 469 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 TSSK4Q6SA08 328 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 CYB5R4Q7L1T6 521 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 GET4Q7L5D6 327 aaPredicted RBP13.6□□□□□ -0.23
RFPL3-201ENST00000249007 DDX1Q92499 740 aaKnown RBP13.6□□□□□ -0.23
RFPL3-201ENST00000249007 RRP36Q96EU6 259 aaKnown RBP13.6□□□□□ -0.23
RFPL3-201ENST00000249007 OSBPL6Q9BZF3 934 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 GBP3Q9H0R5 595 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms