RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 HSP90B2PQ58FF3 399 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 CCNI2Q6ZMN8 369 aaPredicted RBP17.16■□□□□ 0.34
LRFN1-201ENST00000248668 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.16■□□□□ 0.34
LRFN1-201ENST00000248668 LARSQ9P2J5 1176 aaKnown RBP17.16■□□□□ 0.34
LRFN1-201ENST00000248668 SEL1LQ9UBV2 794 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 UBIAD1Q9Y5Z9 338 aa17.16■□□□□ 0.34
LRFN1-201ENST00000248668 ZBED4O75132 1171 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 USP8P40818 1118 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 LMAN1P49257 510 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 PCNX4Q63HM2 1172 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 C8orf74Q6P047 294 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 ARHGAP27Q6ZUM4 889 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 SND1Q7KZF4 910 aaKnown RBP eCLIP17.15■□□□□ 0.34
LRFN1-201ENST00000248668 FAM84AQ96KN4 292 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 INTS2Q9H0H0 1204 aaKnown RBP17.15■□□□□ 0.34
LRFN1-201ENST00000248668 ADAM21Q9UKJ8 722 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 RPTORQ8N122 1335 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 CTNND1O60716 968 aaKnown RBP17.15■□□□□ 0.34
LRFN1-201ENST00000248668 KLHL7Q8IXQ5 586 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 PDCD2LQ9BRP1 358 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 STAT1P42224 750 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 JAM2P57087 298 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 BFSP1Q12934 665 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 CFAP221Q4G0U5 840 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 ANGEL2Q5VTE6 544 aaKnown RBP17.15■□□□□ 0.34
LRFN1-201ENST00000248668 SNRNP48Q6IEG0 339 aaKnown RBP17.15■□□□□ 0.34
LRFN1-201ENST00000248668 EMSYQ7Z589 1322 aa17.15■□□□□ 0.34
LRFN1-201ENST00000248668 F8VZ95 297 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 VWA5AO00534 786 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 MAP9Q49MG5 647 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 SAAL1Q96ER3 474 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 KRT12Q99456 494 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 PXMP2Q9NR77 195 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 CHORDC1Q9UHD1 332 aaPredicted RBP17.14■□□□□ 0.33
LRFN1-201ENST00000248668 PALB2Q86YC2 1186 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 LNX1Q8TBB1 728 aaPredicted RBP17.14■□□□□ 0.33
LRFN1-201ENST00000248668 IFT81Q8WYA0 676 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 OSGEPQ9NPF4 335 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 PCDHGC5Q9Y5F6 944 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 TARSL2A2RTX5 802 aaKnown RBP17.14■□□□□ 0.33
LRFN1-201ENST00000248668 MEI1Q5TIA1 1274 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 PHLDB3Q6NSJ2 640 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 HAUS6Q7Z4H7 955 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 MMGT1Q8N4V1 131 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 CCDC127Q96BQ5 260 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 DMAC2Q9NW81 257 aa17.14■□□□□ 0.33
LRFN1-201ENST00000248668 KRT13P13646 458 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 PRLRP16471 622 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 SOX5P35711 763 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 PPP3CAQ08209 521 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 VPS36Q86VN1 386 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 TAF4BQ92750 862 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 TAS2R14Q9NYV8 317 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 HPCAL4Q9UM19 191 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 USP20Q9Y2K6 914 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 CEP104O60308 925 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 TUBBP07437 444 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 H2AFZP0C0S5 128 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 BCRP11274 1271 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 ZNF280AP59817 542 aaPredicted RBP17.13■□□□□ 0.33
LRFN1-201ENST00000248668 RPS6KA1Q15418 735 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 TRADDQ15628 312 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 H2AFVQ71UI9 128 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 KAT5Q92993 513 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 ACP6Q9NPH0 428 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 PICK1Q9NRD5 415 aa17.13■□□□□ 0.33
LRFN1-201ENST00000248668 ANKRD65E5RJM6 399 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 PPP1R37O75864 691 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 GALCP54803 685 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 SKIDA1Q1XH10 827 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 SLC16A10Q8TF71 515 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 AP1M1Q9BXS5 423 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 UBE2TQ9NPD8 197 aaPredicted RBP17.12■□□□□ 0.33
LRFN1-201ENST00000248668 KCND2Q9NZV8 630 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 BZW2Q9Y6E2 419 aaKnown RBP17.12■□□□□ 0.33
LRFN1-201ENST00000248668 FOXN3O00409 490 aaPredicted RBP17.12■□□□□ 0.33
LRFN1-201ENST00000248668 GLI1P08151 1106 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 PLS3P13797 630 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 MCM3P25205 808 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 ZNF746Q6NUN9 644 aaPredicted RBP17.12■□□□□ 0.33
LRFN1-201ENST00000248668 HSPBP1Q9NZL4 362 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 BACE1P56817 501 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 TGFB2P61812 414 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 GUCY2DQ02846 1103 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 DAAM2Q86T65 1068 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 ARHGEF19Q8IW93 802 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 TRPM4Q8TD43 1214 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 SLC20A1Q8WUM9 679 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 POP1Q99575 1024 aaKnown RBP17.12■□□□□ 0.33
LRFN1-201ENST00000248668 VPS33BQ9H267 617 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 STIM2Q9P246 746 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 APEX2Q9UBZ4 518 aa17.12■□□□□ 0.33
LRFN1-201ENST00000248668 RBBP6Q7Z6E9 1792 aaKnown RBP17.11■□□□□ 0.33
LRFN1-201ENST00000248668 ZNF541Q9H0D2 1346 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 FERP16591 822 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 GGCXP38435 758 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 PRKCIP41743 596 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 KCTD17Q8N5Z5 321 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 NEK9Q8TD19 979 aa17.11■□□□□ 0.33
LRFN1-201ENST00000248668 PLEKHO2Q8TD55 490 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms